<?xml version="1.0" encoding="UTF-8"?>
  <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
  <!--Proposed Tool Section: [Identification]-->
  <tool id="SpectraFilterNormalizer" name="SpectraFilterNormalizer" version="2.0.0">
    <description>Normalizes intensity of peak spectra.</description>
    <macros>
      <token name="@EXECUTABLE@">SpectraFilterNormalizer</token>
      <import>macros.xml</import>
    </macros>
    <expand macro="references"/>
    <expand macro="stdio"/>
    <expand macro="requirements"/>
    <command>SpectraFilterNormalizer

#if $param_in:
  -in $param_in
#end if
#if $param_out:
  -out $param_out
#end if
-threads \${GALAXY_SLOTS:-24}
#if $param_algorithm_method:
  -algorithm:method
  #if &quot; &quot; in str($param_algorithm_method):
    &quot;$param_algorithm_method&quot;
  #else
    $param_algorithm_method
  #end if
#end if
#if $adv_opts.adv_opts_selector=='advanced':
    #if $adv_opts.param_force:
  -force
#end if
#end if
</command>
    <inputs>
      <param format="mzml" help="(-in) " label="input file" name="param_in" optional="False" type="data"/>
      <param help="(-method) intensity of one ('to_one') per spectrum" label="Normalize via dividing by TIC ('to_TIC') per spectrum or normalize to max" name="param_algorithm_method" optional="True" type="select" value="to_one">
        <option value="to_one">to_one</option>
        <option value="to_TIC">to_TIC</option>
      </param>
      <expand macro="advanced_options">
        <param checked="false" falsevalue="" help="(-force) " label="Overwrite tool specific checks" name="param_force" optional="True" truevalue="-force" type="boolean"/>
      </expand>
    </inputs>
    <outputs>
      <data format="mzml" name="param_out"/>
    </outputs>
    <help>Normalizes intensity of peak spectra.


For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_SpectraFilterNormalizer.html</help>
  </tool>