diff SemanticValidator.xml @ 0:3d84209d3178 draft

Uploaded
author bgruening
date Fri, 10 Oct 2014 18:20:03 -0400
parents
children 6ead64a594bd
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/SemanticValidator.xml	Fri Oct 10 18:20:03 2014 -0400
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+<?xml version='1.0' encoding='UTF-8'?>
+<tool id="SemanticValidator" name="SemanticValidator" version="1.12.0">
+  <description>SemanticValidator for semantically validating certain XML files.</description>
+  <macros>
+    <token name="@EXECUTABLE@">SemanticValidator</token>
+    <import>macros.xml</import>
+  </macros>
+  <expand macro="stdio"/>
+  <expand macro="requirements"/>
+  <command>SemanticValidator
+
+-in ${param_in}
+-mapping_file ${param_mapping_file}
+-cv ${param_cv}
+-threads \${GALAXY_SLOTS:-24} 
+</command>
+  <inputs>
+    <param name="param_in" type="data" format="mzML" optional="False" label="Input file (any xml file)" help="(-in)"/>
+    <param name="param_mapping_file" type="data" format="" optional="False" label="Mapping file which is used to semantically validate the given XML file against this mapping file (see 'share/OpenMS/MAPPING' for templates)." help="(-mapping_file)"/>
+    <param name="param_cv" type="data" format="" optional="True" size="20" label="Controlled Vocabulary files containg the CV terms (if left empty, a set of default files are used)" help="(-cv)"/>
+  </inputs>
+  <outputs/>
+  <help>**What it does**
+
+SemanticValidator for semantically validating certain XML files.
+
+
+For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_SemanticValidator.html
+
+@REFERENCES@
+</help>
+</tool>