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comparison SemanticValidator.xml @ 0:3d84209d3178 draft

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author bgruening
date Fri, 10 Oct 2014 18:20:03 -0400
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-1:000000000000 0:3d84209d3178
1 <?xml version='1.0' encoding='UTF-8'?>
2 <tool id="SemanticValidator" name="SemanticValidator" version="1.12.0">
3 <description>SemanticValidator for semantically validating certain XML files.</description>
4 <macros>
5 <token name="@EXECUTABLE@">SemanticValidator</token>
6 <import>macros.xml</import>
7 </macros>
8 <expand macro="stdio"/>
9 <expand macro="requirements"/>
10 <command>SemanticValidator
11
12 -in ${param_in}
13 -mapping_file ${param_mapping_file}
14 -cv ${param_cv}
15 -threads \${GALAXY_SLOTS:-24}
16 </command>
17 <inputs>
18 <param name="param_in" type="data" format="mzML" optional="False" label="Input file (any xml file)" help="(-in)"/>
19 <param name="param_mapping_file" type="data" format="" optional="False" label="Mapping file which is used to semantically validate the given XML file against this mapping file (see 'share/OpenMS/MAPPING' for templates)." help="(-mapping_file)"/>
20 <param name="param_cv" type="data" format="" optional="True" size="20" label="Controlled Vocabulary files containg the CV terms (if left empty, a set of default files are used)" help="(-cv)"/>
21 </inputs>
22 <outputs/>
23 <help>**What it does**
24
25 SemanticValidator for semantically validating certain XML files.
26
27
28 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_SemanticValidator.html
29
30 @REFERENCES@
31 </help>
32 </tool>