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comparison tool_dependencies.xml @ 15:aefe2a771a95 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/diffbind commit 10052765d6b712cf7d38356af4251fcc38a339b6-dirty
author bgruening
date Fri, 26 Feb 2016 13:35:28 -0500
parents 42d23a280d80
children
comparison
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14:4de6355eca00 15:aefe2a771a95
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="R" version="3.0.3"> 3 <package name="R" version="3.0.3">
4 <repository changeset_revision="232ebc8b1c0d" name="package_r_3_0_3" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="9a289bea9051" name="package_r_3_0_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="deseq2" version="1.2.10"> 6 <package name="deseq2" version="1.2.10">
7 <repository changeset_revision="2d3eb2823bf7" name="package_deseq2_1_2_10" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="e8df6ebba5ff" name="package_deseq2_1_2_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <set_environment version="1.0">
10 <environment_variable action="set_to" name="DIFFBIND_SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
11 </set_environment>
12 <package name="diffbind" version="1.8.3"> 9 <package name="diffbind" version="1.8.3">
13 <install version="1.0"> 10 <install version="1.0">
14 <actions> 11 <actions>
15 <action type="setup_r_environment"> 12 <action type="setup_r_environment">
16 <repository changeset_revision="232ebc8b1c0d" name="package_r_3_0_3" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu"> 13 <repository changeset_revision="9a289bea9051" name="package_r_3_0_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
17 <package name="R" version="3.0.3" /> 14 <package name="R" version="3.0.3" />
18 </repository> 15 </repository>
19 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/BiocGenerics_0.8.0.tar.gz</package> 16 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/BiocGenerics_0.8.0.tar.gz</package>
20 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/IRanges_1.20.6.tar.gz</package> 17 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/IRanges_1.20.6.tar.gz</package>
21 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/XVector_0.2.0.tar.gz</package> 18 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/XVector_0.2.0.tar.gz</package>