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view tool-data/framebot_ref_gene_databases.loc.sample @ 0:73b3e2f98631 draft default tip

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
author bebatut
date Mon, 16 Nov 2015 02:46:50 -0500
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#This is a sample file distributed with Galaxy that is used to define a
#list of public ribosomal databases for SortMeRNA, using the following format
#(white space characters are TAB characters):
#
#<unique_id>    <database_caption>  <fasta_file_path>
#

alkb_prot_ref	alkb protein sequences	$RDP_TOOLS_DIR/Framebot/refset/alkb_prot_ref.fasta
amoA_prot_ref	amoA protein sequences	$RDP_TOOLS_DIR/Framebot/refset/amoA_prot_ref.fasta
bphA_prot_ref	bphA protein sequences	$RDP_TOOLS_DIR/Framebot/refset/bphA_prot_ref.fasta
buk_prot_ref	buk protein sequences	$RDP_TOOLS_DIR/Framebot/refset/buk_prot_ref.fasta
but_prot_ref	but protein sequences	$RDP_TOOLS_DIR/Framebot/refset/but_prot_ref.fasta
nifh_nucl_ref_polyprimers	nifh nucleotide sequences flanked by the Poly nifH primers	$RDP_TOOLS_DIR/Framebot/refset/nifh_nucl_ref_polyprimers
nifh_prot_ref	nifh protein sequences	$RDP_TOOLS_DIR/Framebot/refset/nifh_prot_ref.fasta
nifh_prot_ref_polyprimers	nifh protein sequences flanked by the Poly nifH primers	$RDP_TOOLS_DIR/Framebot/refset/nifh_prot_ref_polyprimers.fasta
p450_prot_ref	p450 protein sequences	$RDP_TOOLS_DIR/Framebot/refset/p450_prot_ref.fasta
pmoA_prot_ref	pmoAprotein sequences	$RDP_TOOLS_DIR/Framebot/refset/pmoA_prot_ref.fasta