Mercurial > repos > bebatut > rdptools
comparison tool-data/framebot_ref_gene_databases.loc.sample @ 0:73b3e2f98631 draft default tip
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
| author | bebatut |
|---|---|
| date | Mon, 16 Nov 2015 02:46:50 -0500 |
| parents | |
| children |
comparison
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| -1:000000000000 | 0:73b3e2f98631 |
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| 1 #This is a sample file distributed with Galaxy that is used to define a | |
| 2 #list of public ribosomal databases for SortMeRNA, using the following format | |
| 3 #(white space characters are TAB characters): | |
| 4 # | |
| 5 #<unique_id> <database_caption> <fasta_file_path> | |
| 6 # | |
| 7 | |
| 8 alkb_prot_ref alkb protein sequences $RDP_TOOLS_DIR/Framebot/refset/alkb_prot_ref.fasta | |
| 9 amoA_prot_ref amoA protein sequences $RDP_TOOLS_DIR/Framebot/refset/amoA_prot_ref.fasta | |
| 10 bphA_prot_ref bphA protein sequences $RDP_TOOLS_DIR/Framebot/refset/bphA_prot_ref.fasta | |
| 11 buk_prot_ref buk protein sequences $RDP_TOOLS_DIR/Framebot/refset/buk_prot_ref.fasta | |
| 12 but_prot_ref but protein sequences $RDP_TOOLS_DIR/Framebot/refset/but_prot_ref.fasta | |
| 13 nifh_nucl_ref_polyprimers nifh nucleotide sequences flanked by the Poly nifH primers $RDP_TOOLS_DIR/Framebot/refset/nifh_nucl_ref_polyprimers | |
| 14 nifh_prot_ref nifh protein sequences $RDP_TOOLS_DIR/Framebot/refset/nifh_prot_ref.fasta | |
| 15 nifh_prot_ref_polyprimers nifh protein sequences flanked by the Poly nifH primers $RDP_TOOLS_DIR/Framebot/refset/nifh_prot_ref_polyprimers.fasta | |
| 16 p450_prot_ref p450 protein sequences $RDP_TOOLS_DIR/Framebot/refset/p450_prot_ref.fasta | |
| 17 pmoA_prot_ref pmoAprotein sequences $RDP_TOOLS_DIR/Framebot/refset/pmoA_prot_ref.fasta |