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annotate tool-data/framebot_ref_gene_databases.loc.sample @ 0:73b3e2f98631 draft default tip

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
author bebatut
date Mon, 16 Nov 2015 02:46:50 -0500
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73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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1 #This is a sample file distributed with Galaxy that is used to define a
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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2 #list of public ribosomal databases for SortMeRNA, using the following format
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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3 #(white space characters are TAB characters):
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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4 #
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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5 #<unique_id> <database_caption> <fasta_file_path>
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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6 #
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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8 alkb_prot_ref alkb protein sequences $RDP_TOOLS_DIR/Framebot/refset/alkb_prot_ref.fasta
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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9 amoA_prot_ref amoA protein sequences $RDP_TOOLS_DIR/Framebot/refset/amoA_prot_ref.fasta
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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10 bphA_prot_ref bphA protein sequences $RDP_TOOLS_DIR/Framebot/refset/bphA_prot_ref.fasta
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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11 buk_prot_ref buk protein sequences $RDP_TOOLS_DIR/Framebot/refset/buk_prot_ref.fasta
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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12 but_prot_ref but protein sequences $RDP_TOOLS_DIR/Framebot/refset/but_prot_ref.fasta
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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13 nifh_nucl_ref_polyprimers nifh nucleotide sequences flanked by the Poly nifH primers $RDP_TOOLS_DIR/Framebot/refset/nifh_nucl_ref_polyprimers
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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14 nifh_prot_ref nifh protein sequences $RDP_TOOLS_DIR/Framebot/refset/nifh_prot_ref.fasta
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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15 nifh_prot_ref_polyprimers nifh protein sequences flanked by the Poly nifH primers $RDP_TOOLS_DIR/Framebot/refset/nifh_prot_ref_polyprimers.fasta
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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16 p450_prot_ref p450 protein sequences $RDP_TOOLS_DIR/Framebot/refset/p450_prot_ref.fasta
73b3e2f98631 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/rdptools commit fa8135b9b1918785c3f3b3fb7325bfe031b44ec4
bebatut
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17 pmoA_prot_ref pmoAprotein sequences $RDP_TOOLS_DIR/Framebot/refset/pmoA_prot_ref.fasta