Mercurial > repos > bebatut > package_rdptools_2_0_2
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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/packages/package_rdptools_2_0_2 commit 0b70097b8f61a995378c409fe3aa2a1663a47906-dirty
author | bebatut |
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date | Tue, 10 Nov 2015 04:50:06 -0500 |
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<?xml version="1.0"?> <tool_dependency> <package name="ant" version="1.9.6"> <repository changeset_revision="c49abc8cead0" name="package_ant_1_9_6" owner="bebatut" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="rdptools" version="2.0.2"> <install version="1.0"> <actions> <action type="shell_command">git clone --recursive https://github.com/rdpstaff/RDPTools.git rdptools</action> <action type="change_directory">rdptools</action> <action type="shell_command">git checkout 2.0.2</action> <action type="shell_command">git submodule update --init</action> <action type="shell_command">make</action> <action type="change_directory">../</action> <action type="shell_command">mv rdptools/ $INSTALL_DIR/</action> <action type="set_environment"> <environment_variable action="set_to" name="RDP_TOOLS_DIR">$INSTALL_DIR/rdptools/</environment_variable> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> </action> </actions> </install> <readme> RDPTols is an open source command-line tool suite for performing a complete workflow of analysis tasks of NGS data. Clone the github repository and configure the tools. For more details, see: https://github.com/rdpstaff/RDPTools </readme> </package> </tool_dependency>