view tool_dependencies.xml @ 1:594c81c557a1 draft default tip

planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/packages/package_python_2_7_fisher_0_1_4 commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
author bebatut
date Tue, 12 Apr 2016 02:53:25 -0400
parents 22205b5425c8
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<?xml version="1.0"?>
<tool_dependency>
    <package name="python" version="2.7.10">
        <repository changeset_revision="a28e3c30828d" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="numpy" version="1.9">
        <repository changeset_revision="fe0870696ca7" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="fisher" version="0.1.4">
        <install version="1.0">
            <actions>
                <action type="setup_python_environment">
                   <repository changeset_revision="a28e3c30828d" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                       <package name="python" version="2.7.10" />
                   </repository>
                   <repository changeset_revision="fe0870696ca7" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="numpy" version="1.9" />
                    </repository>
                    <package md5sum="bfc763b7333a1f428e4c447dd8a85968">
                        https://pypi.python.org/packages/source/f/fisher/fisher-0.1.4.tar.gz
                    </package>
                </action>
                <action type="set_environment">
                    <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
                    <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
                    <environment_variable action="set_to" name="PYTHONPATH_FISHER">$INSTALL_DIR</environment_variable>
                    <environment_variable action="set_to" name="FISHER_ROOT_PATH">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>Simple, fast implementation of Fisher’s exact test.</readme>
    </package>
</tool_dependency>