view tool_dependencies.xml @ 0:adbc6f21f132 draft default tip

planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/packages/package_goatools_0_5_9 commit 313952cc4a20e8fb82380bfbf5ede26217197719
author bebatut
date Mon, 22 Feb 2016 07:08:36 -0500
parents
children
line wrap: on
line source

<?xml version="1.0"?>
<tool_dependency>
    <package name="fisher" version="0.1.4">
        <repository changeset_revision="22205b5425c8" name="package_python_2_7_fisher_0_1_4" owner="bebatut" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="goatools" version="0.5.9">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://github.com/tanghaibao/goatools/archive/v0.5.9.zip</action>
                <action type="move_directory_files">
                    <source_directory>.</source_directory>
                    <destination_directory>$INSTALL_DIR/</destination_directory>
                </action>

                <action type="setup_python_environment">
                    <repository changeset_revision="22205b5425c8" name="package_python_2_7_fisher_0_1_4" owner="bebatut" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="fisher" version="0.1.4" />
                    </repository>

                    <package md5sum="2d5f1f9319dbf59850bf92cfa71e92ee">https://pypi.python.org/packages/source/g/goatools/goatools-0.5.9.tar.gz</package>
                </action>

                <action type="set_environment">
                    <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
                    <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_FISHER]</environment_variable>
                    <environment_variable action="set_to" name="PYTHONPATH_GOATOOLS">$INSTALL_DIR</environment_variable>
                    <environment_variable action="set_to" name="GOATOOLS_ROOT_PATH">$INSTALL_DIR</environment_variable>
                    <environment_variable action="set_to" name="GOATOOLS_DIR">$INSTALL_DIR/</environment_variable>
                </action>
            </actions>
        </install>
        <readme />
    </package>
</tool_dependency>