Mercurial > repos > bebatut > metaphlan2

diff tool_dependencies.xml @ 23:62f9857766e6 draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/sortmerna/ commit eb7c3b4b1b4f2b11d105c091ce20df6d89fd6790
author bebatut
date Tue, 08 Dec 2015 09:05:02 -0500
parents 9ab0e6e9d1fb
children 51e7d53fcefb
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--- a/tool_dependencies.xml	Tue Nov 17 06:01:20 2015 -0500
+++ b/tool_dependencies.xml	Tue Dec 08 09:05:02 2015 -0500
@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="bowtie2" version="2.2.4">
-        <repository changeset_revision="aef49b7f08b2" name="bowtie2" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    <package name="bowtie2" version="2.2.5">
+        <repository changeset_revision="f5582ac5ba3c" name="package_bowtie_2_2_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="metaphlan2" version="2.0">
         <install version="1.0">
@@ -12,7 +12,7 @@
                     <destination_directory>$INSTALL_DIR/</destination_directory>
                 </action>
                 <action type="set_environment">
-                    <environment_variable action="set_to" name="METAPHLAN2_DIR">$INSTALL_DIR/biobakery-metaphlan2-d1016b2f4e10/</environment_variable>
+                    <environment_variable action="set_to" name="METAPHLAN2_DIR">$INSTALL_DIR/</environment_variable>
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                 </action>
             </actions>