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view tool-data/humann2_nucleotide_database.loc.sample @ 0:947012405a6e draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit dd6f3fda4d992efa4a91ee0823ecc3af8a9532d3-dirty
author bebatut
date Thu, 17 Dec 2015 08:58:05 -0500
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#This is a sample file distributed with Galaxy that is used to define a
#list of public ribosomal databases for SortMeRNA, using the following format
#(white space characters are TAB characters):
#
#<unique_id>	<database_caption>	<fasta_file_path>
#
#Each nucleotide database have to be downloaded using humann2. For example:
#
#  humann2_databases --download chocophlan full $HUMANN2_DIR/chocophlan
#
#Since HUMAnN2 comes bundled with 1 nucleotide database (chocophlan), you can use it
#by downloading it as explained above and uncommenting the following lines.
#chocophlan	ChocoPhlAn	$HUMANN2_DIR/databases/chocophlan/