Mercurial > repos > bebatut > humann2
diff tool-data/humann2_nucleotide_database.loc.sample @ 0:947012405a6e draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit dd6f3fda4d992efa4a91ee0823ecc3af8a9532d3-dirty
| author | bebatut |
|---|---|
| date | Thu, 17 Dec 2015 08:58:05 -0500 |
| parents | |
| children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/humann2_nucleotide_database.loc.sample Thu Dec 17 08:58:05 2015 -0500 @@ -0,0 +1,13 @@ +#This is a sample file distributed with Galaxy that is used to define a +#list of public ribosomal databases for SortMeRNA, using the following format +#(white space characters are TAB characters): +# +#<unique_id> <database_caption> <fasta_file_path> +# +#Each nucleotide database have to be downloaded using humann2. For example: +# +# humann2_databases --download chocophlan full $HUMANN2_DIR/chocophlan +# +#Since HUMAnN2 comes bundled with 1 nucleotide database (chocophlan), you can use it +#by downloading it as explained above and uncommenting the following lines. +#chocophlan ChocoPhlAn $HUMANN2_DIR/databases/chocophlan/