Mercurial > repos > bebatut > export2graphlan
diff export2graphlan.xml @ 4:4a3676d020e7 draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
author | bebatut |
---|---|
date | Wed, 20 Apr 2016 06:08:58 -0400 |
parents | 953621231a6c |
children | f05bc567f1a5 |
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--- a/export2graphlan.xml Fri Apr 01 05:51:29 2016 -0400 +++ b/export2graphlan.xml Wed Apr 20 06:08:58 2016 -0400 @@ -1,4 +1,4 @@ -<tool id="export2graphlan" name="Export to GraPhlAn" version="0.1.0"> +<tool id="export2graphlan" name="Export to GraPhlAn" version="0.19"> <description></description> @@ -6,7 +6,7 @@ <requirement type="package" version="0.16">pandas</requirement> <requirement type="package" version="0.16">scipy</requirement> <requirement type="package" version="1.4">matplotlib</requirement> - <requirement type="package" version="1.0">export2graphlan</requirement> + <requirement type="package" version="0.19">export2graphlan</requirement> </requirements> <stdio> @@ -192,8 +192,8 @@ <param name="fperc" value=""/> <param name="stop" value=""/> <param name="ftop" value=""/> - <output name="annotation" file="output_annotation.txt"/> - <output name="tree" file="output_tree.txt"/> + <output name="annotation" file="annotation_output.txt"/> + <output name="tree" file="tree_output.txt"/> </test> </tests> @@ -201,7 +201,11 @@ **What it does** -export2graphlan is a conversion software tool for producing both annotation and tree file for GraPhlAn. In particular, the annotation file tries to highlight specific sub-trees deriving automatically from input file what nodes are important. For more information, check the +export2graphlan is a conversion software tool for producing both annotation and tree file for GraPhlAn. It can convert MetaPhlAn, LEfSe, and/or HUMAnN output to GraPhlAn input format + +In particular, the annotation file tries to highlight specific sub-trees deriving automatically from input file what nodes are important. + +For more information, check the `user manual <https://bitbucket.org/CibioCM/export2graphlan/overview/>`_. ]]></help>