Mercurial > repos > bebatut > cdhit

diff tool_dependencies.xml @ 3:626cd6334dbc draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/cdhit/ commit ea0424ae045ac797c080aeabab9a8536f7eb2f84-dirty
author bebatut
date Mon, 25 Apr 2016 12:13:50 -0400
parents aa923171e225
children
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Apr 14 09:24:49 2016 -0400
+++ b/tool_dependencies.xml	Mon Apr 25 12:13:50 2016 -0400
@@ -15,7 +15,7 @@
                 </action>
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
-                    <environment_variable name="CDHIT_SITE_OPTIONS" action="set_to">"-M 4000 -T 0"</environment_variable>
+                    <environment_variable name="CDHIT_SITE_OPTIONS" action="set_to">"-M 4000"</environment_variable>
                 </action>
             </actions>
         </install>
@@ -29,9 +29,7 @@
 https://code.google.com/p/cdhit/source/browse/README
 
 Change the CDHIT_SITE_OPTIONS variable in the installed env.sh file to adjust 
-the maximum memory Mb (-M) or to limit the number of threads (-T)
-to match your site 
+the maximum memory Mb (-M).
         </readme>
     </package>
-</tool_dependency>
-
+</tool_dependency>
\ No newline at end of file