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Repository bcftools_stats
Name: bcftools_stats
Owner: jjohnson
Synopsis: Wrapper for bcftools application bcftools stats.
https://samtools.github.io/bcftools/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools
Link to this repository: https://eddie.galaxyproject.org/view/jjohnson/bcftools_stats/d541f5c15870
Clone this repository: hg clone https://eddie.galaxyproject.org/repos/jjohnson/bcftools_stats
Type: unrestricted
Revision: 1:d541f5c15870
This revision can be installed: True
Times cloned / installed: 40
Dependencies of this repository

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
bcftools 1.3 package
samtools 1.2 package
tabix 0.2.6 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Parses VCF or BCF and produces stats which can be plotted using plot-vcfstats 1.3.0 any
Create consensus sequence by applying VCF variants to a reference fasta file 1.3.0 any