Repository 'data_manager_fetch_plasmidfinder'
hg clone https://eddie.galaxyproject.org/repos/pimarin/data_manager_fetch_plasmidfinder

Changeset 7:ed0f59ab5e61 (2023-08-23)
Previous changeset 6:4e933a39094f (2023-08-23) Next changeset 8:f99089461adb (2023-08-23)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f2f2ea487a2313a18e5871e5d089b0e248f5fefe
modified:
data_manager_conf.xml
tool-data/plasmidfinder_database.loc.sample
removed:
plasmidfinder_database.loc
b
diff -r 4e933a39094f -r ed0f59ab5e61 data_manager_conf.xml
--- a/data_manager_conf.xml Wed Aug 23 08:23:25 2023 +0000
+++ b/data_manager_conf.xml Wed Aug 23 10:57:19 2023 +0000
b
@@ -1,10 +1,11 @@
+<?xml version="1.0"?>
 <data_managers>
     <data_manager tool_file="data_manager/plasmidfinder_fetch_database.xml" id="plasmidfinder_fetch_database">
         <data_table name="plasmidfinder_database">
             <output>
-                <column name="value" />
-                <column name="name" />
-                <column name="date" />
+                <column name="value"/>
+                <column name="name"/>
+                <column name="date"/>
                 <column name="path" output_ref="output_file">
                     <move type="directory" relativize_symlinks="True">
                         <source>${path}</source>
b
diff -r 4e933a39094f -r ed0f59ab5e61 plasmidfinder_database.loc
--- a/plasmidfinder_database.loc Wed Aug 23 08:23:25 2023 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
b
@@ -1,8 +0,0 @@
-# this is a tab separated file describing the location of plasmidfinder database
-# The name was obtained by merging date of download and commit number
-# the columns are:
-# value, name, date, path
-#
-# for example
-#plasmidfinder_9002e7282dd0_2022-12-20 9002e7282dd0_2022-12-20 2022-12-20 plasmidfinder-db
-#plasmidfinder_1307168b1ce7_2022-12-20 2.1_2022-12-20 2022-12-20 plasmidfinder-db
b
diff -r 4e933a39094f -r ed0f59ab5e61 tool-data/plasmidfinder_database.loc.sample
--- a/tool-data/plasmidfinder_database.loc.sample Wed Aug 23 08:23:25 2023 +0000
+++ b/tool-data/plasmidfinder_database.loc.sample Wed Aug 23 10:57:19 2023 +0000
b
@@ -4,5 +4,4 @@
 # value, name, date, path
 #
 # for example
-#plasmidfinder_9002e7282dd0_2022-12-20 9002e7282dd0_2022-12-20 2022-12-20 plasmidfinder-db
-#plasmidfinder_1307168b1ce7_2022-12-20 2.1_2022-12-20 2022-12-20 plasmidfinder-db
+#plasmidfinder_1307168_2019_08_28 2.1_2019_08_28 2019_08_28 plasmidfinder-db