| Next changeset 1:6dd8062546e8 (2013-07-15) |
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Commit message:
Uploaded |
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added:
tool_dependencies.xml |
| b |
| diff -r 000000000000 -r ae2ef1b65c47 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Mon Jul 15 18:13:24 2013 -0400 |
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| @@ -0,0 +1,25 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="zlib" version="1.2.8"> + <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="zlib" owner="nilesh" changeset_revision="28f618926504" /> + </package> + <package name="ea-utils" version="1.1.2"> + <install version="1.0"> + <actions> + <action type="set_environment_for_install"> + <repository changeset_revision="28f618926504" name="zlib" owner="nilesh" toolshed="http://testtoolshed.g2.bx.psu.edu"> + <package name="zlib" version="1.2.8" /> + </repository> + </action> + <action type="download_by_url">https://code.google.com/p/ea-utils/downloads/detail?name=ea-utils.1.1.2-537.tar.gz</action> + <action type="shell_command">PREFIX=$INSTALL_DIR make install CFLAGS="-O3 -I. -L$ZLIB_PATH"</action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + </actions> + </install> + </package> + <set_environment version="1.0"> + <environment_variable name="RNASEQCPATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable> + </set_environment> +</tool_dependency> |