| Previous changeset 5:b21082c0b9b7 (2019-08-01) Next changeset 7:5bfa9dedb0f6 (2019-08-01) |
|
Commit message:
planemo upload for repository https://github.com/computational-metabolomics/sirius_csifingerid_galaxy commit 53357475a8dab4174c3e9cb2163776b2ed127d71 |
|
modified:
sirius_csifingerid.py sirius_csifingerid.xml test-data/invalid_adduct_result.tsv |
| b |
| diff -r b21082c0b9b7 -r 199293713c99 sirius_csifingerid.py --- a/sirius_csifingerid.py Thu Aug 01 07:43:40 2019 -0400 +++ b/sirius_csifingerid.py Thu Aug 01 12:21:36 2019 -0400 |
| [ |
| @@ -269,6 +269,10 @@ outfiles.sort(key = lambda s: int(re.match('^.*/(\d+).*/.*/summary_csi_fingerid.csv', s).group(1))) print(outfiles) +if len(outfiles) == 0: + print('No results') + sys.exit() + headers = [] c = 0 for fn in outfiles: |
| b |
| diff -r b21082c0b9b7 -r 199293713c99 sirius_csifingerid.xml --- a/sirius_csifingerid.xml Thu Aug 01 07:43:40 2019 -0400 +++ b/sirius_csifingerid.xml Thu Aug 01 12:21:36 2019 -0400 |
| b |
| @@ -1,4 +1,4 @@ -<tool id="sirius_csifingerid" name="SIRIUS-CSI:FingerID" version="4.0.1+galaxy0.2.4"> +<tool id="sirius_csifingerid" name="SIRIUS-CSI:FingerID" version="4.0.1+galaxy0.2.5"> <description> </description> <requirements> <requirement type="package" version="4.0.1">sirius-csifingerid</requirement> |
| b |
| diff -r b21082c0b9b7 -r 199293713c99 test-data/invalid_adduct_result.tsv --- a/test-data/invalid_adduct_result.tsv Thu Aug 01 07:43:40 2019 -0400 +++ b/test-data/invalid_adduct_result.tsv Thu Aug 01 12:21:36 2019 -0400 |
| b |
| @@ -1,1 +0,0 @@ -name |