Mercurial > repos > yating-l > twobit_to_fa_340

annotate test-data/contig12_seq_list.soft.fa @ 1:5eacdd456df2 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload
author yating-l
date Tue, 16 May 2017 15:44:25 -0400
parents cd7248925d52
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
1 >contig10:1000-2000
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
2 TCGACAAGCCCTCGACTCTGGCTCCAAGTACATTAAAAAATCAGATGATT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
3 TTAACATTGCCTTCAATTAAACAGGTAAGATTTATTACAAAATATTGAAT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
4 AATTTACAAATCGCGTTAATTCATTCTGCAGGAAACCATTTTACTTCCTC
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
5 ATAATTCTTTTATTACAAACATTTTTCTAACCACGTGCACCTATATCACA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
6 ACATATGTGGAAAATGGAAGCTCGAATGTAGTAAAAGAAAAAATGGTTAT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
7 ATCAAACACCATTACGCAAGATCGAAAGTATTTGCATGCAAGTAATCCTA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
8 TGATAATAGACATCACTTTTTCAAGGGTAAGCATCAAATCAATTGTAAAA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
9 TTGCACGTCTTAAAACTTGTTTGTTATTTTTAATGTTCAGACTCCAGAAC
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
10 TAGTGGTTGGAATGTTCCCAACAAGATATCATTATTTTAACACAATACGT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
11 AGAGACCAACCGGATTCAACTCTAATGGTAGTCACTTCAAAATATACTGT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
12 TATAAATACAATCACGAGACCTGCACATTCTTTGACTTTTATAAATTCAG
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
13 GCGACAATCTTTCGCCCACCACAAATACCTACATCAGTCAAATATTTTTT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
14 ACTAAAACTGTCTACGGCAAAAACCAAACACCAACATATGGCACAAGTAT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
15 AAGTAATCTTACACAAGTCGTTATTACAGAATCCCTTTCAGAAACCGGTC
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
16 CAGCTTATATAAGTTCAATAGGACCTGAGTATTTTTCAATTTCGGACAAA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
17 AAAAAAAATTATTTACTTCGGTAATAGAAATATCTGACTATCTAATGATA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
18 TACTCAACCAAGTCCTTATTAGAAACGAATACTCTATGTTCAGCAAAATT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
19 TAATAATAGTTTGACTATGGTAGCTTCATATGTTTCTTTGACAAAGACAG
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
20 TCTGCGAAAGTGATCCAAAAGTATCTAACAATAACTTAAAGCTTCACACT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
21 AACACTATAAATAATATTGCTACCAATACAGTGGGTAGTTCGCTGATAAA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
22 >contig10:4000-5000
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
23 CGTTGATGTCTACAAAAAGACGTATTGAGACTGGCAATACAAACATGGTG
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
24 TTTCTGACAACAGGTGACCATTTGCGTGTCGAACCCTTAACAGAAAATAC
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
25 AATTAATTCAGTAAATTCTGAATTTATCTCGAGCACAAACATCTTTAACA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
26 CAAATTACTCAGTTATCGCTACTGAACCCTCTCAACTAAGATCAAGAATA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
27 TATAAAGAATCAAATATGTTTGGCCTTACGTCAAACAACAACCTCCAGGT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
28 AAAACCATCTTTTGTAAAACCCCTGCGCAGTTCAGCAATGCCAGTTATAA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
29 ATGCAATTACATTTTCACACGTTTTAGTAAGAGCACCGCATTCTGACTTT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
30 GGTCCAAACTGGCAAGATTCGACATTAGGCATAATATGCCACACTGAAAG
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
31 TTGCAAAAAAAAATTATTAAAAGAATTTAAGCACGATATCAAAATGCTTG
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
32 AACCATCTGAAATGTTGCAGGATGAAATACCTTCAGTTTCAAAAAAAACA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
33 TCTGAATGGGATAAGATTTCAGTGCTAGCAGAAAATTCGAACGCCATAAT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
34 CCCTATGCATTCTACACCTTCGCATACTAACAAAACAATTAAATATTTTA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
35 AAATAGTAACCCCCACTAAAACAAACCGGGTTAGTATAAAAAACGTATCT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
36 ACAATCAAAACAAATTTTGATGCAAATAAATACATATTTATGAATCACTC
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
37 TATCGCTAACCTATCGAAATACTATATGAAGGAACCAATTTCGATTGGTT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
38 CAGACAAATTATTTACATCCTCAAGGATAAGCAACCAGTCACAAGTAATT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
39 GACAAAAGTAATGTTACAACTTTAAGTGACGTGCCTCAAAGATTAAAGAC
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
40 TTCAGACTATCTAGCGAACGAATCTTTTACAGAAAACATTTTAGGGTTTT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
41 CCAAGCACTCAGGGCTCAGAAGCAAATCAAGCTTAGGTTCTAATCGAGAT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
42 GAGCATGTGTATGCTTCCAGCGACATAGATAGTATGCTCTTTGGTGCTAT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
43 >contig12:4000-5000
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
44 CAGCAAACACATTGTTTATGTCTAACCAAAGTGGACCCTTCTGGGTACCG
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
45 CCGTGGCTGGAACGCTTTTATGACAGGACGACCGTGTCGCGACAAGGATA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
46 ACTGTTGTTATTACGGTGCCGTCaggcgatataagaactgtgctgaggat
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
47 gagctacagagctgaggatgagatacagtaagctgctagtagagaaagtg
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
48 cctagccctatttccagaggtaggaagATTTGGCTCAAAACCTATGTTtt
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
49 tttttaatttaacttgtttttatttttaagaaattaaataataggtgtcg
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
50 tcaaaaaaaggtattttgaaagaagaggtTTTAAAGTATTAATCAAGCAT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
51 ACGCTGTTTTTTCCAATTTTAAAAAATTATAACTATTCcaaaaaagaaag
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
52 taatcttcagcaatccgaagtttgtataccctagcagttatgattaatga
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
53 aagtaacaccatattacgttttaaagtattgttgtcagcttcagtaatat
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
54 aaaaaaaaaaatttattaattatttcattgtttgtctgatcgtttctttg
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
55 acagctacacgttggagtggtcctatttgtaacaaattaaattctaaatt
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
56 cttaaaaatacaaaaaatgatattcccaatagtataggataatatgtcga
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
57 gaacaccgaagctttaattcattttatgttattttcccacagattttctg
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
58 atcgtctctgtggcaactatatgatatagtcgtccgattttgataaaata
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
59 aaattcgacattcagaactaattaaaaaatgttatttccaagcctatggg
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
60 gttacatgttaaataacacaaaagttataattttttaaaattgttttttt
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
61 ccgattattcttatgTAttatatactacttgcaaaagaagtaaagtttca
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
62 gcccaatagctttaaaacttagagattagtttgcgtagaaacggcataca
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
63 ggcggacggcagacatgtctaaatcgactcgtctagtgatgctaatcaag
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
64 >contig12:1000-2000
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
65 TAATTATAAAATAAATTAATAAAATTAAATTATTTTCAGTTGGTAATTAC
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
66 AGTCGAATAAAACTTCAATAAAATGCGCTTTTTTATTTATTTATGTAATT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
67 GTGCTAAATAAAGAAAATTTAAAAACACTGAACAGGCACATTCTATTAGT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
68 AAAGCTACAGTTTTTTCTTATGAGATTTATTAAGTTTCCGGCGTTTCAAT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
69 ATCATATCATAAAGAGCTTCTAGGCCTTCTTGAAGTCCCTCGCCAGTTAT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
70 CGCACAGGTCGGTTGTATATACCACCCCCTAAAGTGCATCGAGTTGGAAA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
71 AGGTCCTGTTATGTTTTTTGTTATGAAAACAGTTTTTACCATCACGCGAA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
72 TTTTTTTGGTCCTTCACATCAGAACCTTTGCCAGAATGCGGATATATGAA
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
73 TGTAGACAACGCCTCTCCACTTAACGTAGTCCTTTGTTCGTCACTTTCAG
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
74 GAGCAGGTTTAATGTGAATCATTGATGAATGCAGGTGATTTGATCTTTGC
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
75 TCTGTTAACGAGGTTTCTGTAATACTTTGGTTTGACTTGCTACATCCGAT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
76 TAAATTGATGGTGGAAGAAGAGTCGGAACAAGTTAGCATCGATATGTTCG
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
77 GCACTGGGTTATAAAGCTCGTTCAGTCCTAAAAGTTTTTCCAGCTCCATT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
78 GCACCACACGCGTTTGGAAGATCTTGCTTATTTGCTAATATCAGCACTGG
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
79 AACACCCTTTGAAAAACATAAAAAATAAAGCATTTCGTTTTGTTATAGTT
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
80 TTTATTTTATATTAACTTCGTTTTAGTGGTTTACTTTCTTTATATGTATG
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
81 TACATAAAAGACTGAACCGCCCACTCAATTTAGCCGTATGTTTATGAAta
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
82 tcactatggacggcagtccacgtagtgacgacgcgcaccTTTGGGGAaga
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
83 aataaaaatttagagtaatccgattgtttcgagtcatacctaaatcggaa
cd7248925d52 planemo upload
yating-l
parents:
diff changeset
84 tgtattgcaaaagctaaaagaattgcataccaagacttttaaaaaatttt