Mercurial > repos > yating-l > trfbig

comparison tool_dependencies.xml @ 0:9b27da80dcea draft

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planemo upload for repository https://github.com/goeckslab/trfBig commit 97fd3895fbafc69df1a1c4092f261ba23fc0bd0b-dirty
author yating-l
date Mon, 01 May 2017 16:04:14 -0400
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children ed530f232f63
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-1:000000000000 0:9b27da80dcea
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <!-- Package trfBig -->
4 <package name="trfBig" version="1.0">
5 <install version="1.0">
6 <actions>
7 <action type="download_binary" target_directory="bin">
8 <url_template os="darwin">http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/trfBig</url_template>
9 <url_template os="linux">http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/trfBig</url_template>
10 </action>
11 <action type="chmod">
12 <file mode="750">$INSTALL_DIR/bin/trfBig</file>
13 </action>
14 <action type="set_environment">
15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
16 </action>
17 </actions>
18 </install>
19 <readme>The tools downloaded by this dependency definition are free for academic use.</readme>
20 </package>
21
22 <!-- Package trf -->
23 <!-- https://tandem.bu.edu/trf/downloads/trf407b.linux64 -->
24 <package name="trf" version="4.07b">
25 <install version="1.0">
26 <actions>
27 <action type="download_by_url" target_directory="bin">
28 <url_template os="darwin">https://tandem.bu.edu/trf/downloads/trf407b.macos64</url_template>
29 <url_template os="linux">https://tandem.bu.edu/trf/downloads/trf407b.linux64</url_template>
30 </action>
31 <action type="move_file" rename_to="trf">
32 <source>$INSTALL_DIR/trf407b.macos64</source>
33 <destination>$INSTALL_DIR/bin</destination>
34 </action>
35 <action type="move_file" rename_to="trf">
36 <source>$INSTALL_DIR/trf407b.linux64</source>
37 <destination>$INSTALL_DIR/bin</destination>
38 </action>
39 <action type="chmod">
40 <file mode="750">$INSTALL_DIR/bin/trf</file>
41 </action>
42 <action type="set_environment">
43 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
44 </action>
45 </actions>
46 </install>
47 <readme>The tools downloaded by this dependency definition are free for academic use.</readme>
48 </package>
49 </tool_dependency>