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author yating-l
date Mon, 19 Dec 2016 14:49:37 -0500
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1 # regtools
2 A Galaxy Wrapper for regtools
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4 This is a modified Galaxy wrapper for regtools which is based on the previous wrapper written by Remi Marenco (https://github.com/remimarenco/regtools). "regtools is a set of tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context" (https://regtools.readthedocs.io/en/latest/).
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6 This wrapper add an validation step to check if the output files are valid BED format. The lines with invalid strand (neighter "+" or "-") will be removed. The scores higher than 1000 will be changed to 1000. All modified lines will be reported to the standard output.