Mercurial > repos > yating-l > package_snap_0_1_0

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planemo upload commit 0ba99fe246099cc1827f71f2722d253becee64ba
author yating-l
date Thu, 21 Jul 2016 17:25:37 -0400
parents 9b410d18d689
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4:9b410d18d689 5:0bc612de916e
2 <tool_dependency> 2 <tool_dependency>
3 <package name="snap" version="0.1.0"> 3 <package name="snap" version="0.1.0">
4 <install version="0.1.0"> 4 <install version="0.1.0">
5 <actions> 5 <actions>
6 <action type="download_by_url">http://korflab.ucdavis.edu/Software/snap-2013-11-29.tar.gz</action> 6 <action type="download_by_url">http://korflab.ucdavis.edu/Software/snap-2013-11-29.tar.gz</action>
7 <action type="shell_command">rm snap-2013-11-29.tar.gz</action>
8 <action type="move_directory_files">
9 <source_directory>.</source_directory>
10 <destination_directory>$INSTALL_DIR</destination_directory>
11 </action>
7 <action type="shell_command">make</action> 12 <action type="shell_command">make</action>
8 <action type="set_environment"> 13 <action type="set_environment">
9 <environment_variable name="ZOE" action="set_to">$INSTALL_DIR</environment_variable> 14 <environment_variable name="ZOE" action="set_to">$INSTALL_DIR</environment_variable>
10 <environment_variable name="SNAP_PATH" action="set_to">$INSTALL_DIR</environment_variable> 15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
11 </action> 16 </action>
12 </actions> 17 </actions>
13 </install> 18 </install>
14 <readme>SNAP is a general purpose gene finding program suitable for both eukaryotic 19 <readme>SNAP is a general purpose gene finding program suitable for both eukaryotic
15 and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid 20 and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid
16 Parser. 21 Parser.
17 </readme> 22 </readme>
18 </package> 23 </package>
19 </tool_dependency> 24 </tool_dependency>