Mercurial > repos > yating-l > jbrowsearchivecreator

diff tool_dependencies.xml @ 32:7b955a58d8f2 draft

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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
author yating-l
date Fri, 20 Oct 2017 11:22:21 -0400
parents 127037c49bc8
children b15dbdd7fd96
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--- a/tool_dependencies.xml	Mon Oct 16 18:03:58 2017 -0400
+++ b/tool_dependencies.xml	Fri Oct 20 11:22:21 2017 -0400
@@ -77,25 +77,4 @@
          <readme>The perl scripts for converting flat files to json.</readme>
     </package>
 
-    <package name="apollo_api" version="3.0.3">
-        <install version="1.0">
-            <actions>
-                <action type="download_by_url">https://github.com/galaxy-genome-annotation/python-apollo/archive/3.0.3.tar.gz</action>
-                <action type="make_directory">$INSTALL_DIR/apollo</action>
-                <action type="shell_command">
-                    export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/apollo &amp;&amp; 
-                    python setup.py install --install-lib $INSTALL_DIR/apollo
-                </action>
-                <action type="make_directory">$INSTALL_DIR/apollo/config</action>
-                
-                <action type="set_environment">
-                    <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/apollo</environment_variable>
-                    <environment_variable action="append_to" name="PATH">$INSTALL_DIR/apollo</environment_variable>
-                </action>
-            </actions>
-        </install>
-    </package>
-
-
-    
 </tool_dependency>