Mercurial > repos > yating-l > hubarchivecreatortest

comparison macros.xml @ 3:fa990284327b draft default tip

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planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit ac73da32d59853ca563e7939d05016a6f3a6899e-dirty
author yating-l
date Mon, 30 Oct 2017 11:58:31 -0400
parents 7486909dfc22
children
comparison
equal deleted inserted replaced
2:7486909dfc22 3:fa990284327b
50 <extra_files type="file" name="myHub/@GENOME@/description.html" value="@TEST@/myHub/@GENOME@/description.html"/> 50 <extra_files type="file" name="myHub/@GENOME@/description.html" value="@TEST@/myHub/@GENOME@/description.html"/>
51 </xml> 51 </xml>
52 52
53 <xml name="add_trix_file"> 53 <xml name="add_trix_file">
54 <conditional name="add_trix_index"> 54 <conditional name="add_trix_index">
55 <param name="add_trix_index_selector" type="select" label="Add TRIX files that maps free text to a set of indices" > 55 <param name="add_trix_index_selector" type="select" label="Add Trix index that allow for fast look-up of free text associated with a list of identifiers." help="More about Trix index: https://genome.ucsc.edu/goldenpath/help/trix.html">
56 <option value="no" selected="true">No</option> 56 <option value="no" selected="true">No</option>
57 <option value="yes">Yes</option> 57 <option value="yes">Yes</option>
58 </param> 58 </param>
59 59
60 <when value="yes"> 60 <when value="yes">
61 <param 61 <param
62 name="trix_id" 62 name="trix_index"
63 value="name" 63 format="txt"
64 type="text" 64 type="data_collection"
65 size="30" 65 collection_type="list"
66 label="Specify Trix identifier" 66 label="Specify Trix index"
67 help="More about Trix index: https://genome.ucsc.edu/goldenpath/help/trix.html" 67 help="Dataset collection containing ix and ixx files generated by UCSC Trix Index Generator"
68 /> 68 />
69 <conditional name="index_files"> 69 <yield />
70 <param name="index_files_type" type="select" label="Single files or an index collection" help="Select between provide individual trix files (ix and ixx) or an trix index collection">
71 <option value="collection">Index collection</option>
72 <option value="single">Single files</option>
73 </param>
74 <when value="collection">
75 <param
76 name="trix_index"
77 format="txt"
78 type="data_collection"
79 collection_type="list"
80 label="Select dataset collection"
81 help="Specify dataset collection containing ix and ixx files"
82 />
83 </when>
84 <when value="single">
85 <param
86 format="txt"
87 name="index_ix"
88 type="data"
89 label="Trix index file (ix)"
90 />
91 <param
92 format="txt"
93 name="index_ixx"
94 type="data"
95 label="Trix index file (ixx)"
96 />
97 </when>
98 </conditional>
99 </when> 70 </when>
100 <when value="no"> 71 <when value="no">
101 </when> 72 </when>
102 </conditional> 73 </conditional>
103 </xml> 74 </xml>