Mercurial > repos > yating-l > hubarchivecreator

comparison Datatype.py @ 52:c66803bff0cc draft

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planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit adc1ac50269e02570e7ce12c732637bdd3f9a547-dirty
author yating-l
date Thu, 11 May 2017 17:21:15 -0400
parents 364b8db8de17
children b39dd0b5a166
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51:364b8db8de17 52:c66803bff0cc
64 return chrom_sizes.readline().split()[0] 64 return chrom_sizes.readline().split()[0]
65 65
66 # TODO: Rename for PEP8 66 # TODO: Rename for PEP8
67 def getShortName( self, name_to_shortify ): 67 def getShortName( self, name_to_shortify ):
68 # Slice to get from Long label the short label 68 # Slice to get from Long label the short label
69 short_label_slice = slice(0, 15) 69 short_label_slice = slice(0, 17)
70 70
71 return name_to_shortify[short_label_slice] 71 return name_to_shortify[short_label_slice]
72 72
73 # TODO: Better handle parameters, use heritance mecanism 73 # TODO: Better handle parameters, use heritance mecanism
74 # TODO: Use default parameters for some, like visibility 74 # TODO: Use default parameters for some, like visibility