Mercurial > repos > yating-l > hubarchivecreator

comparison Gff3.py @ 58:a0fc8379223c draft

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planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 72268f816f10341dbe3f6b33f8d9170d859c9697
author yating-l
date Fri, 30 Jun 2017 15:44:17 -0400
parents b39dd0b5a166
children
comparison
equal deleted inserted replaced
57:b39dd0b5a166 58:a0fc8379223c
54 subtools.bedToBigBed(sorted_biGenePred_file.name, 54 subtools.bedToBigBed(sorted_biGenePred_file.name,
55 self.chromSizesFile.name, 55 self.chromSizesFile.name,
56 bigBedFile.name, 56 bigBedFile.name,
57 autoSql=auto_sql_option, 57 autoSql=auto_sql_option,
58 typeOption='bed12+8', 58 typeOption='bed12+8',
59 tab=True) 59 tab=True,
60 extraIndex='name')
60 61
61 # Create the Track Object 62 # Create the Track Object
62 self.createTrack(file_path=trackName, 63 self.createTrack(file_path=trackName,
63 track_name=trackName, 64 track_name=trackName,
64 long_label=self.long_label, 65 long_label=self.long_label,