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comparison bigPsl.py @ 65:5a4206366b41 draft

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author yating-l
date Wed, 09 Aug 2017 16:40:21 -0400
parents b39dd0b5a166
children
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64:9d8d6b976fc2 65:5a4206366b41
24 self.database = data_bigpsl["database"] 24 self.database = data_bigpsl["database"]
25 if data_bigpsl["long_label"]: 25 if data_bigpsl["long_label"]:
26 self.long_label = data_bigpsl["long_label"] 26 self.long_label = data_bigpsl["long_label"]
27 else: 27 else:
28 self.long_label = self.name_bigpsl 28 self.long_label = self.name_bigpsl
29 if data_bigpsl["search_index"]:
30 self.search_index = data_bigpsl["search_index"]
31 else:
32 self.search_index = ""
29 #sortedBedFile = tempfile.NamedTemporaryFile(suffix=".sortedBed") 33 #sortedBedFile = tempfile.NamedTemporaryFile(suffix=".sortedBed")
30 34
31 # Sort processing 35 # Sort processing
32 #subtools.sort(self.input_bigpsl_false_path, sortedBedFile.name) 36 #subtools.sort(self.input_bigpsl_false_path, sortedBedFile.name)
33 37