Mercurial > repos > yating-l > gonramp_apollo_tools
comparison tool_dependencies.xml @ 0:1da8b9042af4 draft
planemo upload for repository https://github.com/Yating-L/suite_gonramp_apollo.git commit 9009fa8663038d2cb4a1c5130600a51f31f654a1-dirty
| author | yating-l |
|---|---|
| date | Mon, 27 Nov 2017 14:47:03 -0500 |
| parents | |
| children |
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| -1:000000000000 | 0:1da8b9042af4 |
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| 1 <?xml version="1.0"?> | |
| 2 <tool_dependency> | |
| 3 | |
| 4 <package name="apollo_api" version="3.0.3"> | |
| 5 <install version="1.0"> | |
| 6 <actions> | |
| 7 <action type="download_by_url">https://github.com/galaxy-genome-annotation/python-apollo/archive/3.0.3.tar.gz</action> | |
| 8 <action type="make_directory">$INSTALL_DIR/apollo</action> | |
| 9 <action type="shell_command"> | |
| 10 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/apollo && | |
| 11 python setup.py install --install-lib $INSTALL_DIR/apollo | |
| 12 </action> | |
| 13 <action type="set_environment"> | |
| 14 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/apollo</environment_variable> | |
| 15 <environment_variable action="append_to" name="PATH">$INSTALL_DIR/apollo</environment_variable> | |
| 16 </action> | |
| 17 </actions> | |
| 18 </install> | |
| 19 </package> | |
| 20 | |
| 21 | |
| 22 | |
| 23 </tool_dependency> |