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comparison omero_filter.xml @ 5:e6b2a026843d draft default tip

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planemo upload for repository https://github.com/Helmholtz-UFZ/galaxy-tools/tree/main/tools/omero commit 3a3a04c0b20310f8d4fbc5be27559353c7e2cc61
author ufz
date Tue, 10 Feb 2026 16:47:59 +0000
parents 25d2036b9b8b
children
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4:25d2036b9b8b 5:e6b2a026843d
1 <tool id="omero_filter" name="OMERO IDs" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@" license="MIT"> 1 <tool id="omero_filter" name="OMERO IDs" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@" license="MIT">
2 <description> with ezomero </description> 2 <description> with ezomero </description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 <token name="@VERSION_SUFFIX@">2</token> 5 <token name="@VERSION_SUFFIX@">3</token>
6 </macros> 6 </macros>
7 <xrefs> 7 <xrefs>
8 <xref type="bio.tools">omero</xref> 8 <xref type="bio.tools">omero</xref>
9 </xrefs> 9 </xrefs>
10 <expand macro="ezomero_requirements"/> 10 <expand macro="ezomero_requirements"/>
18 export OMERO_PASSWORD="$test_password" && 18 export OMERO_PASSWORD="$test_password" &&
19 #end if 19 #end if
20 20
21 python '$__tool_directory__'/omero_filter.py 21 python '$__tool_directory__'/omero_filter.py
22 @HOST_PORT@ 22 @HOST_PORT@
23 --filter $filter 23 --filter $filter_type.filter
24 --value1 '$value1' 24 --value1 '$filter_type.value1'
25 --id $did 25 --id '$filter_type.did'
26 --tsv_file '$tsv' 26 --tsv_file '$tsv'
27 #if $filter == "KP" 27 #if $filter == "KP"
28 --value2 '$value2' 28 --value2 '$filter_type.value2'
29 #end if 29 #end if
30 @SESSION_ID@ 30 @SESSION_ID@
31 ]]></command> 31 ]]></command>
32 <inputs> 32 <inputs>
33 <expand macro="host_port"/> 33 <expand macro="host_port"/>