Mercurial > repos > trinity_ctat > testing_how_to_do_this

changeset 7:f7e70316b7ca draft default tip

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Uploaded
author trinity_ctat
date Thu, 31 Aug 2017 15:50:15 -0400
parents 4c1d32673942
children
files trinity.xml
diffstat 1 files changed, 3 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/trinity.xml	Thu Aug 31 15:36:54 2017 -0400
+++ b/trinity.xml	Thu Aug 31 15:50:15 2017 -0400
@@ -129,8 +129,9 @@
     <help>
 This instance is running Trinity version 2.4.0 and uses the following command:
 
-	 Trinity --max_memory \${TRINITY_MAX_MEMORY:-31G} --CPU \${GALAXY_SLOTS:-4} --seqType seq_type --single singlefile or --left left_file --right right_file
-         Define TRINITY_MAX_MEMORY and GALAXY_SLOTS to change the default values for --max_memory and --CPU.
+	 Trinity --max_memory 31G --CPU 4 --seqType seq_type --single singlefile or --left left_file --right right_file
+
+Define TRINITY_MAX_MEMORY and GALAXY_SLOTS to change the default values for --max_memory and --CPU, respectively.
 
 .. class:: infomark