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comparison gmap_fusion.xml @ 1:c4f6e9bc1d5d draft default tip

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Adding fusion_inspector tool.
author trinity_ctat
date Wed, 24 Jan 2018 12:56:59 -0500
parents cedd4953aefe
children
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0:cedd4953aefe 1:c4f6e9bc1d5d
1 <tool id="gmap-fusion" name="GMAP-fusion" version="1.0.0" profile="17.05"> 1 <tool id="gmap-fusion" name="GMAP-fusion" version="1.0.0" profile="17.05">
2 <description>Fusion-finding Using De novo RNA-Seq Transcript Assemblies</description> 2 <description>Fusion-finding Using De novo RNA-Seq Transcript Assemblies</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.1.2">gmap-fusion</requirement> 4 <requirement type="package" version="0.3.0">gmap-fusion</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="default"> 6 <command detect_errors="default">
7 GMAP-fusion 7 GMAP-fusion
8 -T $assembled_trans 8 -T $assembled_trans
9 --left_fq $left_input 9 --left_fq $left_input