Mercurial > repos > trinity_ctat > edger_differential_expression

comparison EdgeR_differentialExpression.xml @ 4:bfd09008aae7 draft

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Adding rsem dependencies to other tools.
author trinity_ctat
date Mon, 02 Oct 2017 14:58:26 -0400
parents 93f07220f08c
children d66c05101513
comparison
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3:70b3058d39d9 4:bfd09008aae7
1 <tool id="EdgeR_differentialExpression" name="EdgeR_differentialExpression" version="1.0.0"> 1 <tool id="EdgeR_differentialExpression" name="EdgeR_differentialExpression" version="1.0.0">
2 2
3 <description>Identify Differentially Expressed Transcripts Using EdgeR</description> 3 <description>Identify Differentially Expressed Transcripts Using EdgeR</description>
4 <requirements> 4 <requirements>
5 <requirement type="package" version="2.7">python</requirement> 5 <requirement type="package" version="2.7">python</requirement>
6 <requirement type="package" version="1.3.0">rsem</requirement>
6 <requirement type="package">trinity</requirement> 7 <requirement type="package">trinity</requirement>
7 </requirements> 8 </requirements>
8 <command> 9 <command>
9 <![CDATA[ 10 <![CDATA[
10 python $__tool_directory__/EdgeR_differentialExpression_wrapper.py 11 python $__tool_directory__/EdgeR_differentialExpression_wrapper.py