Mercurial > repos > trinity_ctat > ctat_mutations

comparison ctat_mutations.xml @ 4:9e6395f093d2 draft

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author trinity_ctat
date Sat, 10 Nov 2018 11:23:07 -0500
parents 692ecdf2d881
children 4bcee0138ac9
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3:692ecdf2d881 4:9e6395f093d2
30 <param name="genome_resource_lib" type="select" label="Select a reference genome"> 30 <param name="genome_resource_lib" type="select" label="Select a reference genome">
31 <options from_data_table="ctat_genome_resource_libs"> 31 <options from_data_table="ctat_genome_resource_libs">
32 <filter type="sort_by" column="2" /> 32 <filter type="sort_by" column="2" />
33 <validator type="no_options" message="No indexes are available" /> 33 <validator type="no_options" message="No indexes are available" />
34 </options> 34 </options>
35 </param> 35 </param>
36 <param name="cravat_email" type="text" label="CRAVAT email" help="CRAVAT registered email id"/>
36 <section name="adv" title="This service uses the GATK4. GATK4 is licensed by the Broad Institute and is made available to academic users of this service for non-commercial use only. The full text of the license is available here: https://www.broadinstitute.org/gatk/about/license.html. For more information about GATK and full documentation, please visit the GATK website: https://www.broadinstitute.org." expanded="False"> 37 <section name="adv" title="This service uses the GATK4. GATK4 is licensed by the Broad Institute and is made available to academic users of this service for non-commercial use only. The full text of the license is available here: https://www.broadinstitute.org/gatk/about/license.html. For more information about GATK and full documentation, please visit the GATK website: https://www.broadinstitute.org." expanded="False">
37 </section> 38 </section>
38 </inputs> 39 </inputs>
39 <outputs> 40 <outputs>
40 <data format="tabular" name="cancertab" label="${tool.name} on ${on_string}: Cancer Tab" from_work_dir="varcalling.outdir/cancer.tab"/> 41 <data format="tabular" name="cancertab" label="${tool.name} on ${on_string}: Cancer Tab" from_work_dir="varcalling.outdir/cancer.tab"/>