# HG changeset patch
# User trinity_ctat
# Date 1531541618 14400
# Node ID ed9a7b92439126fa49ea783c02e5b277baa6bef3
# Parent  06f8b9c84b67a1dea4d0b0463eb0bb730e0758c6
Uploaded

diff -r 06f8b9c84b67 -r ed9a7b924391 data_manager/add_ctat_lncrna_annotations.xml
--- a/data_manager/add_ctat_lncrna_annotations.xml	Fri Jun 22 12:31:25 2018 -0400
+++ b/data_manager/add_ctat_lncrna_annotations.xml	Sat Jul 14 00:13:38 2018 -0400
@@ -38,13 +38,21 @@
         <data name="out_file" format="data_manager_json" />
     </outputs>
     <help>
+        .. class:: infomark	
         Retrieve, and/or specify the location of, a CTAT lncrna annotations.
-        When download is true, the file at 
-        will be the URL from which the annotations is downloaded. Currently that is the only supported annotations.
+        When download is true, the annotations from this website_ will be downloaded.
+ 
+        Currently mm9,mm10,hg19,hg38 are supported.
+
+        .. class:: infomark
         Specify the Full Path of the destination where the CTAT lncrna annotations should be placed.
         If you already have the annotations, specify the full path of the location where it exists and leave the download box unchecked.
+
+        .. class:: infomark
         The display_name may be left empty if downloading. 
         The display_name will be used as the selector text of the entry in the data table.
+
+        .. _website: https://data.broadinstitute.org/Trinity/CTAT/lncrna/annotations.tar.gz         
     </help>
     <code file="add_ctat_lncrna_annotations.py" />
 </tool>