# HG changeset patch
# User trinity_ctat
# Date 1523647063 14400
# Node ID 059a8ddb65b9242cc2a21ee1c4c3b2d68f8d0446
# Parent  0eb5017147e2c3d46bab4cc5e19c40feddaa4abd
Trying to fix problems with ctat_star_fusion and ctat_metagenomics.

diff -r 0eb5017147e2 -r 059a8ddb65b9 repository_dependencies.xml
--- a/repository_dependencies.xml	Thu Apr 12 13:42:31 2018 -0400
+++ b/repository_dependencies.xml	Fri Apr 13 15:17:43 2018 -0400
@@ -1,12 +1,14 @@
 <?xml version="1.0"?>
-<repositories description="These tools were developed by The Broad Institute as the Cancer Transcriptome Analysis Toolkit (CTAT).">  <repository changeset_revision="46902e08288c" name="ctat_abundance_estimation_to_matrix" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="45798c8f5b95" name="ctat_concatenate" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+<repositories description="These tools were developed by The Broad Institute as the Cancer Transcriptome Analysis Toolkit (CTAT).">  <repository changeset_revision="e5182440ba17" name="ctat_metagenomics" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="9e1ec910f66f" name="ctat_abundance_estimation_to_matrix" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8e019a9f8b7c" name="ctat_rsem_align_and_estimate_abundance" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3268b5e6ab4a" name="ctat_star_fusion" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="03155bc11cff" name="ctat_analyze_differential_expression" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="94a777b31e20" name="ctat_discasm" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="35202fc192a7" name="ctat_trinity_rnaseq" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8291ea96690f" name="ctat_trinity_rnaseq" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="78547514909d" name="ctat_clean_headers" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="ff3d3fa91f9a" name="ctat_fusion_inspector" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8e019a9f8b7c" name="ctat_rsem_align_and_estimate_abundance" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="45798c8f5b95" name="ctat_concatenate" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="f77032cd0463" name="ctat_edger_differential_expression" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="854531fa1645" name="ctat_gmap_fusion" owner="trinity_ctat" toolshed="https://testtoolshed.g2.bx.psu.edu" />
 </repositories>