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comparison analyze_diff_exp.xml @ 1:54f173578868 draft

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Changing input formats for analyze differential expression.
author trinity_ctat
date Mon, 02 Oct 2017 11:53:20 -0400
parents 5bbc80dbfb5f
children 9b2226f8c2fe
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0:5bbc80dbfb5f 1:54f173578868
9 <![CDATA[ 9 <![CDATA[
10 python $__tool_directory__/analyze_diff_exp_wrapper.py $EdgeRTarGz $TMM_Matrix_FPKM $Pvalue $Cvalue 10 python $__tool_directory__/analyze_diff_exp_wrapper.py $EdgeRTarGz $TMM_Matrix_FPKM $Pvalue $Cvalue
11 ]]> 11 ]]>
12 </command> 12 </command>
13 <inputs> 13 <inputs>
14 <param name="EdgeRTarGz" label="EdgeR tar gz file" type="data" format="file"/> 14 <param name="EdgeRTarGz" label="EdgeR tar gz file" type="data" format="txt"/>
15 <param name="TMM_Matrix_FPKM" label="TMM Normalized FPKM matrix" type="data" format="file" /> 15 <param name="TMM_Matrix_FPKM" label="TMM Normalized FPKM matrix" type="data" format="tabular" />
16 <param name="Pvalue" label="P-value" value="0.05" type="float" /> 16 <param name="Pvalue" label="P-value" value="0.05" type="float" />
17 <param name="Cvalue" label="C-value" value="0" type="float" /> 17 <param name="Cvalue" label="C-value" value="0" type="float" />
18 18
19 </inputs> 19 </inputs>
20 <outputs> 20 <outputs>