Mercurial > repos > tomnl > frag4feature
diff frag4feature.xml @ 6:e94ce372d03d draft
planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit 9ea2ca0892fa55c21491c93afba790e8d9427e01-dirty
| author | tomnl |
|---|---|
| date | Wed, 04 Apr 2018 16:43:00 -0400 |
| parents | 2365c3b350fa |
| children | 9501e9b13b48 |
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--- a/frag4feature.xml Fri Mar 30 10:07:11 2018 -0400 +++ b/frag4feature.xml Wed Apr 04 16:43:00 2018 -0400 @@ -1,4 +1,8 @@ -<tool id="frag4feature" name="frag4feature" version="0.0.17"> +<tool id="frag4feature" name="frag4feature" version="0.0.18"> + <description> + Assign fragmentation spectra to XCMS features using msPurity + </description> + <macros> <import>macros.xml</import> </macros> @@ -8,9 +12,7 @@ <!-- <requirement type="package" version="1.46.0" >bioconductor-xcms</requirement>--> </expand> - <description> - Assign fragmentation spectra to XCMS features using msPurity - </description> + <stdio> <exit_code range="1:" /> </stdio> @@ -77,11 +79,11 @@ </inputs> <outputs> <data name="frag4feature_grouped_msms" format="tsv" label="${tool.name} on ${on_string}: tsv" - from_work_dir="frag4feature.tsv" visible="true"/> + from_work_dir="frag4feature.tsv" /> <data name="frag4feature_rdata" format="rdata" label="${tool.name} on ${on_string}: RData" - from_work_dir="frag4feature.RData" visible="true"/> + from_work_dir="frag4feature.RData" /> <data name="frag4feature_sqlite" format="sqlite" label="${tool.name} on ${on_string}: Sqlite" - from_work_dir="alldata.sqlite" visible="true"/> + from_work_dir="alldata.sqlite" /> </outputs> <tests> <test> @@ -102,7 +104,7 @@ </output> </test> </tests> - <expand macro="citations" /> + <help><![CDATA[ ============================================================= Link fragmentation spectra to XCMS features @@ -134,4 +136,6 @@ ]]></help> +<expand macro="citations" /> + </tool>