Mercurial > repos > tomnl > flag_remove_peaks

diff flag-remove-peaks.xml @ 2:9c4fabc5f7f9 draft

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planemo upload for repository https://github.com/computational-metabolomics/dma-tools-galaxy commit d4159f1962ef3fe37dd4f3047e4050afe013c15a
author tomnl
date Mon, 23 Apr 2018 05:46:43 -0400
parents 6701ecb1a3b0
children 0ccb8c91be19
line wrap: on
line diff
--- a/flag-remove-peaks.xml	Tue Mar 27 07:17:31 2018 -0400
+++ b/flag-remove-peaks.xml	Mon Apr 23 05:46:43 2018 -0400
@@ -1,10 +1,9 @@
 <tool id="flag_remove_peaks" name="flag_remove_peaks" version="0.1.3">
-    <macros>
-        <import>macros.xml</import>
-    </macros>
-
-    <expand macro="requirements">
-    </expand>
+    <requirements>
+        <requirement type="package" >r</requirement>
+	    <requirement type="package" >r-optparse</requirement>
+        <requirement type="package" version="0.0.3" >r-xcmswrapper</requirement>
+    </requirements>
     <description>Tool to flag and remove XCMS grouped peaks from the xcmsSet object based on various thresholds
         (e.g. RSD of intensity and retention time).
     </description>
@@ -256,4 +255,4 @@
 
 The output file is an xcmsSet.RData file.
     ]]></help>
-</tool>
+</tool>
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