Mercurial > repos > tomnl > create_sqlite_db

comparison create_sqlite_db.xml @ 5:9ab472c5714c draft

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planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit afee93a926072b534bb3541e1524f1ad6a7decb9
author tomnl
date Mon, 23 Apr 2018 06:10:07 -0400
parents ff61a6fb23bf
children c59965822dc8
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4:ff61a6fb23bf 5:9ab472c5714c
74 74
75 </inputs> 75 </inputs>
76 <outputs> 76 <outputs>
77 <data name="lcms_data_sqlite" format="sqlite" label="${tool.name} on ${on_string}: LC-MS(/MS) data SQLite db" 77 <data name="lcms_data_sqlite" format="sqlite" label="${tool.name} on ${on_string}: LC-MS(/MS) data SQLite db"
78 from_work_dir="lcms_data.sqlite" /> 78 from_work_dir="lcms_data.sqlite" />
79 <data name="cpeakgroup_msms" format="sqlite" label="${tool.name} on ${on_string}: c-peak-group-msms" 79 <data name="cpeakgroup_msms" format="tsv" label="${tool.name} on ${on_string}: c-peak-group-msms"
80 from_work_dir="cpeakgroup_msms.tsv" /> 80 from_work_dir="cpeakgroup_msms.tsv" />
81 81
82 </outputs> 82 </outputs>
83 <tests> 83 <tests>
84 <test> 84 <test>
95 </conditional> 95 </conditional>
96 <param name="camera_xcms" value="xcms"/> 96 <param name="camera_xcms" value="xcms"/>
97 <param name="xset_xa" value="LCMS_1_LCMS_2_LCMSMS_1_LCMSMS_2.xset.group.rdata"/> 97 <param name="xset_xa" value="LCMS_1_LCMS_2_LCMSMS_1_LCMSMS_2.xset.group.rdata"/>
98 <param name="pa" value="frag4feature.rdata"/> 98 <param name="pa" value="frag4feature.rdata"/>
99 <output name="cpeakgroup_msms" value="cpeakgroup_msms.tsv" > 99 <output name="cpeakgroup_msms" value="cpeakgroup_msms.tsv" >
100
100 </output> 101 </output>
101 </test> 102 </test>
102 </tests> 103 </tests>
103 104
104 <help><![CDATA[ 105 <help><![CDATA[