Mercurial > repos > tomnl > anticipated_purity_lcms

comparison create_sqlite_db.R @ 19:9d1c2dcba63d draft

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planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit c43e21459ffc8f45349a0af6d60c6783dca6005d-dirty
author tomnl
date Tue, 15 May 2018 08:13:03 -0400
parents 44c89290ac66
children ce268299ecd2
comparison
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18:44c89290ac66 19:9d1c2dcba63d
123 rtrawColumns <- FALSE 123 rtrawColumns <- FALSE
124 }else{ 124 }else{
125 rtrawColumns <- TRUE 125 rtrawColumns <- TRUE
126 } 126 }
127 if (is.null(xset)){ 127 if (is.null(xset)){
128 xset <- xa@xset 128 xset <- xa@xcmsSet
129 } 129 }
130 # previous check should have matched filelists together 130 # previous check should have matched filelists together
131 xset@filepaths <- unname(pa@fileList) 131 xset@filepaths <- unname(pa@fileList)
132 132
133 # Saves the EICS into the previously created database 133 # Saves the EICS into the previously created database