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changeset 3:aa0f22545cfd draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rpfba commit 3bc34bfc82850daa2229724c396dcd9454039273-dirty
author tduigou
date Fri, 18 Nov 2022 16:13:23 +0000
parents ef783701afd7
children
files rpfba.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/rpfba.xml	Wed Nov 16 10:56:41 2022 +0000
+++ b/rpfba.xml	Fri Nov 18 16:13:23 2022 +0000
@@ -2,7 +2,7 @@
     <description>for the RetroPath2.0 heterologous pathways</description>
     <macros>
         <token name="@VERSION_SUFFIX@">0</token>
-        <token name="@TOOL_VERSION@">5.13.1</token>
+        <token name="@TOOL_VERSION@">6.0.1</token>
     </macros>
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">rptools</requirement>
@@ -67,7 +67,7 @@
     <tests>
         <test>
         <!-- test 1: check if identical outputs are produced with R_BIOMASS__3 biomass name ID and BiGG model (iCN718)  -->
-            <param name="pathway" value="rp_001_0001.xml" />
+            <param name="pathway" value="rp_001_0001_rpfba_in.xml" />
             <param name="model" value="iCN718.xml.gz" />
             <param name="biomass_rxn_id" value="R_BIOMASS__3" />
             <output name="pathway_with_fba" >
@@ -83,7 +83,7 @@
         </test>
         <test>
         <!-- test 2: check if identical outputs are produced with R_BIOMASS__3 biomass name ID and BiGG model (iCN718)  and sim_type=fba-->
-            <param name="pathway" value="rp_001_0001.xml" />
+            <param name="pathway" value="rp_001_0001_rpfba_in.xml" />
             <param name="model" value="iCN718.xml.gz" />
             <param name="biomass_rxn_id" value="R_BIOMASS__3" />
             <conditional name="input_sim_type">
@@ -101,7 +101,7 @@
         </test>
         <test>
         <!-- test 3: check if identical outputs are produced with R_DM_biomass_c biomass name ID and BiGG model (iCN718)  and sim_type=pfba-->
-            <param name="pathway" value="rp_001_0001.xml" />
+            <param name="pathway" value="rp_001_0001_rpfba_in.xml" />
             <param name="model" value="iCN718.xml.gz" />
             <param name="biomass_rxn_id" value="R_DM_biomass_c" />
             <conditional name="input_sim_type">