Mercurial > repos > tduigou > retropath2

comparison retropath2_wrapper.xml @ 9:23d2987132ab draft

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planemo upload commit 13c2d871e134331cf1a70a638bd97eea82322935-dirty
author tduigou
date Tue, 18 Apr 2023 08:49:20 +0000
parents 91523c7ab46a
children db0138e42c19
comparison
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8:91523c7ab46a 9:23d2987132ab
27 --topx '$adv.topx' 27 --topx '$adv.topx'
28 --dmin '$adv.dmin' 28 --dmin '$adv.dmin'
29 --dmax '$adv.dmax' 29 --dmax '$adv.dmax'
30 --mwmax_source '$adv.mwmax_source' 30 --mwmax_source '$adv.mwmax_source'
31 --kinstall "\${TMPDIR:-.}" 31 --kinstall "\${TMPDIR:-.}"
32 --timeout '$adv.timeout' && 32 --msc_timeout '$adv.timeout' &&
33 if compgen -G 'out/*_scope.csv' > /dev/null; then 33 if compgen -G 'out/*_scope.csv' > /dev/null; then
34 cp out/*_scope.csv '$Reaction_Network'; 34 cp out/*_scope.csv '$Reaction_Network';
35 else 35 else
36 cp out/results.csv '$Reaction_Network'; 36 cp out/results.csv '$Reaction_Network';
37 fi 37 fi