--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/output.json	Fri Jul 11 10:10:16 2025 +0000
@@ -0,0 +1,197 @@
+{
+    "summary": {
+        "num_errors": 0,
+        "num_failures": 0,
+        "num_skips": 0,
+        "num_tests": 2
+    },
+    "tests": [
+        {
+            "data": {
+                "inputs": {
+                    "distribute_json": false,
+                    "json_from_workflow": [
+                        {
+                            "id": "051ed7ff50845d8c",
+                            "src": "hda"
+                        },
+                        {
+                            "id": "25656ddfec77a3b3",
+                            "src": "hda"
+                        }
+                    ]
+                },
+                "job": {
+                    "command_line": "python '/home/rkhaled/galaxytools/tools/parameters_maystro/maystro.py' --distribute_json 'false' --json_from_workflow \"/tmp/tmpfpd6tei1/files/2/f/4/dataset_2f4ca6ae-77d6-4bfe-8e39-0051c294e4f6.dat\" \"/tmp/tmpfpd6tei1/files/9/6/0/dataset_960eac8e-fb66-4982-8009-4896c9e57b38.dat\" --json_from_user 'None' --json_name_mapping /tmp/tmpfpd6tei1/files/2/f/4/dataset_2f4ca6ae-77d6-4bfe-8e39-0051c294e4f6.dat:seq_from_db_param.json,/tmp/tmpfpd6tei1/files/9/6/0/dataset_960eac8e-fb66-4982-8009-4896c9e57b38.dat:seq_to_db_param.json --output_workflow '/tmp/tmpfpd6tei1/job_working_directory/000/3/outputs/dataset_d100f4ee-f845-4a68-be68-004c7af9679d.dat' --output_user '/tmp/tmpfpd6tei1/job_working_directory/000/3/outputs/dataset_1e2a9024-ad29-4d18-b95d-645817393383.dat' && echo 'DEBUB' && cat '/tmp/tmpfpd6tei1/job_working_directory/000/3/outputs/dataset_1e2a9024-ad29-4d18-b95d-645817393383.dat'",
+                    "command_version": "",
+                    "copied_from_job_id": null,
+                    "create_time": "2025-07-11T09:42:39.854743",
+                    "dependencies": [],
+                    "exit_code": 0,
+                    "external_id": "79277",
+                    "galaxy_version": "25.0",
+                    "handler": null,
+                    "history_id": "051ed7ff50845d8c",
+                    "id": "d66447d427a79ce4",
+                    "inputs": {
+                        "json_from_workflow": {
+                            "id": "051ed7ff50845d8c",
+                            "src": "hda",
+                            "uuid": "2f4ca6ae-77d6-4bfe-8e39-0051c294e4f6"
+                        },
+                        "json_from_workflow1": {
+                            "id": "051ed7ff50845d8c",
+                            "src": "hda",
+                            "uuid": "2f4ca6ae-77d6-4bfe-8e39-0051c294e4f6"
+                        },
+                        "json_from_workflow2": {
+                            "id": "25656ddfec77a3b3",
+                            "src": "hda",
+                            "uuid": "960eac8e-fb66-4982-8009-4896c9e57b38"
+                        }
+                    },
+                    "job_messages": [],
+                    "job_metrics": [],
+                    "job_runner_name": null,
+                    "job_stderr": "",
+                    "job_stdout": "",
+                    "model_class": "Job",
+                    "output_collections": {},
+                    "outputs": {
+                        "output_user": {
+                            "id": "39496c7f8d685f43",
+                            "src": "hda",
+                            "uuid": "1e2a9024-ad29-4d18-b95d-645817393383"
+                        },
+                        "output_workflow": {
+                            "id": "d66447d427a79ce4",
+                            "src": "hda",
+                            "uuid": "d100f4ee-f845-4a68-be68-004c7af9679d"
+                        }
+                    },
+                    "params": {
+                        "__input_ext": "\"input\"",
+                        "chromInfo": "\"/tmp/tmpfpd6tei1/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
+                        "dbkey": "\"?\"",
+                        "distribute_json": "false",
+                        "json_from_user": null
+                    },
+                    "state": "ok",
+                    "stderr": "",
+                    "stdout": "[INFO] Watching temp dir for new JSONs: /tmp/tmpfpd6tei1/tmp/maystro_merge_xd06s1et\n[INFO] Initial JSONs from workflow: ['/tmp/tmpfpd6tei1/files/2/f/4/dataset_2f4ca6ae-77d6-4bfe-8e39-0051c294e4f6.dat', '/tmp/tmpfpd6tei1/files/9/6/0/dataset_960eac8e-fb66-4982-8009-4896c9e57b38.dat']\n[INFO] Added data under key: seq_from_db_param\n[INFO] Added data under key: seq_to_db_param\n[INFO] Merged JSON written to: /tmp/tmpfpd6tei1/job_working_directory/000/3/outputs/dataset_1e2a9024-ad29-4d18-b95d-645817393383.dat\n[INFO] Cleaning up: /tmp/tmpfpd6tei1/tmp/maystro_merge_xd06s1et\nDEBUB\n{\n  \"seq_from_db_param\": {\n    \"db_uri\": \"postgresql://postgres:RK17@localhost:5432/test_fragments_db\",\n    \"table\": \"sample\",\n    \"fragment_column\": \"fragment\",\n    \"sequence_column\": \"sequence\",\n    \"annotation_column\": \"annotation\"\n  },\n  \"seq_to_db_param\": {\n    \"execution\": true,\n    \"db_uri\": \"postgresql://postgres:RK17@localhost:5432/test_fragments_db\",\n    \"table\": \"sample\",\n    \"fragment_column\": \"fragment\",\n    \"sequence_column\": \"sequence\",\n    \"annotation_column\": \"annotation\"\n  }\n}",
+                    "tool_id": "parameters_maystro",
+                    "tool_stderr": "",
+                    "tool_stdout": "[INFO] Watching temp dir for new JSONs: /tmp/tmpfpd6tei1/tmp/maystro_merge_xd06s1et\n[INFO] Initial JSONs from workflow: ['/tmp/tmpfpd6tei1/files/2/f/4/dataset_2f4ca6ae-77d6-4bfe-8e39-0051c294e4f6.dat', '/tmp/tmpfpd6tei1/files/9/6/0/dataset_960eac8e-fb66-4982-8009-4896c9e57b38.dat']\n[INFO] Added data under key: seq_from_db_param\n[INFO] Added data under key: seq_to_db_param\n[INFO] Merged JSON written to: /tmp/tmpfpd6tei1/job_working_directory/000/3/outputs/dataset_1e2a9024-ad29-4d18-b95d-645817393383.dat\n[INFO] Cleaning up: /tmp/tmpfpd6tei1/tmp/maystro_merge_xd06s1et\nDEBUB\n{\n  \"seq_from_db_param\": {\n    \"db_uri\": \"postgresql://postgres:RK17@localhost:5432/test_fragments_db\",\n    \"table\": \"sample\",\n    \"fragment_column\": \"fragment\",\n    \"sequence_column\": \"sequence\",\n    \"annotation_column\": \"annotation\"\n  },\n  \"seq_to_db_param\": {\n    \"execution\": true,\n    \"db_uri\": \"postgresql://postgres:RK17@localhost:5432/test_fragments_db\",\n    \"table\": \"sample\",\n    \"fragment_column\": \"fragment\",\n    \"sequence_column\": \"sequence\",\n    \"annotation_column\": \"annotation\"\n  }\n}",
+                    "update_time": "2025-07-11T09:42:45.494563",
+                    "user_email": "planemo@galaxyproject.org",
+                    "user_id": "051ed7ff50845d8c"
+                },
+                "status": "success",
+                "test_index": 0,
+                "time_seconds": 16.301273107528687,
+                "tool_id": "parameters_maystro",
+                "tool_version": "0.1.0+galaxy1"
+            },
+            "has_data": true,
+            "id": "parameters_maystro-0"
+        },
+        {
+            "data": {
+                "inputs": {
+                    "distribute_json": true,
+                    "json_from_user": {
+                        "id": "10ea9be91661a5fd",
+                        "src": "hda"
+                    },
+                    "json_from_workflow": [
+                        {
+                            "id": "b7e19a053756efb9",
+                            "src": "hda"
+                        },
+                        {
+                            "id": "45e8a4dfb17d83f9",
+                            "src": "hda"
+                        }
+                    ]
+                },
+                "job": {
+                    "command_line": "python '/home/rkhaled/galaxytools/tools/parameters_maystro/maystro.py' --distribute_json 'true' --json_from_workflow \"/tmp/tmpfpd6tei1/files/c/1/e/dataset_c1e98b32-965c-4a0d-9c7f-26973a7e0fe6.dat\" \"/tmp/tmpfpd6tei1/files/3/a/5/dataset_3a560c20-0d3f-4aae-abd4-4a460698f28f.dat\" --json_from_user '/tmp/tmpfpd6tei1/files/0/a/b/dataset_0abf65a6-bd5b-47fc-94ba-a6a97fa6d88b.dat' --json_name_mapping /tmp/tmpfpd6tei1/files/c/1/e/dataset_c1e98b32-965c-4a0d-9c7f-26973a7e0fe6.dat:seq_from_db_param.json,/tmp/tmpfpd6tei1/files/3/a/5/dataset_3a560c20-0d3f-4aae-abd4-4a460698f28f.dat:seq_to_db_param.json --output_workflow '/tmp/tmpfpd6tei1/job_working_directory/000/7/outputs/dataset_5254084b-4d71-4098-b933-f73a9e7d5a28.dat' --output_user '/tmp/tmpfpd6tei1/job_working_directory/000/7/outputs/dataset_04c60445-2ff4-4b59-bcbc-75f08b68625a.dat' && echo 'DEBUB' && cat '/tmp/tmpfpd6tei1/job_working_directory/000/7/outputs/dataset_04c60445-2ff4-4b59-bcbc-75f08b68625a.dat'",
+                    "command_version": "",
+                    "copied_from_job_id": null,
+                    "create_time": "2025-07-11T09:42:56.883885",
+                    "dependencies": [],
+                    "exit_code": 0,
+                    "external_id": "79598",
+                    "galaxy_version": "25.0",
+                    "handler": null,
+                    "history_id": "25656ddfec77a3b3",
+                    "id": "10ea9be91661a5fd",
+                    "inputs": {
+                        "json_from_user": {
+                            "id": "10ea9be91661a5fd",
+                            "src": "hda",
+                            "uuid": "0abf65a6-bd5b-47fc-94ba-a6a97fa6d88b"
+                        },
+                        "json_from_workflow": {
+                            "id": "b7e19a053756efb9",
+                            "src": "hda",
+                            "uuid": "c1e98b32-965c-4a0d-9c7f-26973a7e0fe6"
+                        },
+                        "json_from_workflow1": {
+                            "id": "b7e19a053756efb9",
+                            "src": "hda",
+                            "uuid": "c1e98b32-965c-4a0d-9c7f-26973a7e0fe6"
+                        },
+                        "json_from_workflow2": {
+                            "id": "45e8a4dfb17d83f9",
+                            "src": "hda",
+                            "uuid": "3a560c20-0d3f-4aae-abd4-4a460698f28f"
+                        }
+                    },
+                    "job_messages": [],
+                    "job_metrics": [],
+                    "job_runner_name": null,
+                    "job_stderr": "",
+                    "job_stdout": "",
+                    "model_class": "Job",
+                    "output_collections": {},
+                    "outputs": {
+                        "output_user": {
+                            "id": "295d652904818249",
+                            "src": "hda",
+                            "uuid": "04c60445-2ff4-4b59-bcbc-75f08b68625a"
+                        },
+                        "output_workflow": {
+                            "id": "8c61ed432685cfe0",
+                            "src": "hda",
+                            "uuid": "5254084b-4d71-4098-b933-f73a9e7d5a28"
+                        }
+                    },
+                    "params": {
+                        "__input_ext": "\"input\"",
+                        "chromInfo": "\"/tmp/tmpfpd6tei1/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
+                        "dbkey": "\"?\"",
+                        "distribute_json": "true"
+                    },
+                    "state": "ok",
+                    "stderr": "",
+                    "stdout": "DEBUB\n",
+                    "tool_id": "parameters_maystro",
+                    "tool_stderr": "",
+                    "tool_stdout": "DEBUB\n",
+                    "update_time": "2025-07-11T09:43:02.149865",
+                    "user_email": "planemo@galaxyproject.org",
+                    "user_id": "051ed7ff50845d8c"
+                },
+                "status": "success",
+                "test_index": 1,
+                "time_seconds": 16.54760479927063,
+                "tool_id": "parameters_maystro",
+                "tool_version": "0.1.0+galaxy1"
+            },
+            "has_data": true,
+            "id": "parameters_maystro-1"
+        }
+    ],
+    "version": "0.1"
+}
\ No newline at end of file