Mercurial > repos > tduigou > get_db_info

comparison get_DB_data.xml @ 5:a52626182172 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
author tduigou
date Fri, 18 Apr 2025 09:57:55 +0000
parents 61158f32e5c3
children 56a0938d534d
comparison
equal deleted inserted replaced
4:61158f32e5c3 5:a52626182172
23 --output_missing '$output_missing' 23 --output_missing '$output_missing'
24 ]]></command> 24 ]]></command>
25 <inputs> 25 <inputs>
26 <param name="input" type="data" format="csv" label="Input CSV file" /> 26 <param name="input" type="data" format="csv" label="Input CSV file" />
27 <param name="table" type="text" label="Database Table Name" optional="false" /> 27 <param name="table" type="text" label="Database Table Name" optional="false" />
28 <param name="sequence_column" type="text" label="DB column contains sequence for ganbank file" /> 28 <param name="sequence_column" type="text" label="DB column contains sequence for ganbank file" optional="false" />
29 <param name="annotation_columns" type="text" label="DB column contains annotation for ganbank file" /> 29 <param name="annotation_columns" type="text" label="DB column contains annotation for ganbank file" optional="false" />
30 <param name="fragment_column" type="text" label="Database Fragments Column Name" optional="false" /> 30 <param name="fragment_column" type="text" label="Database Fragments Column Name" optional="false" />
31 <param name="db_uri" type="text" label="Database Connection URI" help="postgresql+psycopg2://username:password@db_container_name:port/database" optional="false" /> 31 <param name="db_uri" type="text" label="Database Connection URI" help="postgresql+psycopg2://username:password@db_container_name:port/database" optional="false" />
32 </inputs> 32 </inputs>
33 <outputs> 33 <outputs>
34 <collection name="output_gb" type="list" label="GenBank Files collection" > 34 <collection name="output_gb" type="list" label="GenBank Files collection" >