Mercurial > repos > tduigou > create_assembly_picklists
view output.json @ 0:4bde3e90ee98 draft
planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Plateo commit 98d5e65b8008dbca117b2e0655cfdd54655fac48-dirty
| author | tduigou |
|---|---|
| date | Wed, 06 Aug 2025 08:02:58 +0000 |
| parents | |
| children | 196e13c09881 |
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{ "summary": { "num_errors": 0, "num_failures": 0, "num_skips": 0, "num_tests": 1 }, "tests": [ { "data": { "inputs": { "backbone_name": "HC_Amp_ccdB", "buffer_volume": "0.3", "dispenser": "labcyte_echo", "genbank_files": { "id": "22956832477b7615", "src": "hdca" }, "part_backbone_ratio": "1", "part_quantity": "1.3", "picklist": { "id": "4a52c33acfdf00c5", "src": "hda" }, "quantity_unit": "fmol", "source_plate": { "id": "96bb517ec4711730", "src": "hda" }, "total_volume": "1.0" }, "job": { "command_line": "mkdir renamed_parts && touch 'picklist.zip' && touch 'source_plate.xlsx' && cp '/tmp/tmpi_f681b6/files/6/5/a/dataset_65ad9574-cb7e-4ed9-ad0c-017016d8e92f.dat' 'renamed_parts/HC_Amp_ccdB.gb' && cp '/tmp/tmpi_f681b6/files/1/f/a/dataset_1faa2257-725e-44e8-b913-740b6a05f8b2.dat' 'renamed_parts/conn a-c.gb' && cp '/tmp/tmpi_f681b6/files/f/f/a/dataset_ffa5bc2e-4322-4782-b1d2-c7dc9ba04350.dat' 'renamed_parts/conn b-e.gb' && cp '/tmp/tmpi_f681b6/files/9/9/1/dataset_9919b791-4b3f-47c6-a20a-a5c2d697fabc.dat' 'renamed_parts/conn b-l.gb' && cp '/tmp/tmpi_f681b6/files/f/0/b/dataset_f0b15343-39ee-40cb-8765-a4a84b7e0ea4.dat' 'renamed_parts/conn d-e.gb' && cp '/tmp/tmpi_f681b6/files/5/3/0/dataset_53023c35-65f6-4008-b84d-72fb7ecc4cba.dat' 'renamed_parts/conn d-f.gb' && cp '/tmp/tmpi_f681b6/files/4/3/4/dataset_4345db76-3776-4c15-a608-cbfcbf1755ce.dat' 'renamed_parts/conn h-ha.gb' && cp '/tmp/tmpi_f681b6/files/2/f/9/dataset_2f98e110-7de4-422d-938e-177083ccfe5e.dat' 'renamed_parts/conn h-j.gb' && cp '/tmp/tmpi_f681b6/files/7/2/d/dataset_72d9fac0-2dc0-4147-92fb-e2bf5f75ed19.dat' 'renamed_parts/conn h-k.gb' && cp '/tmp/tmpi_f681b6/files/d/9/b/dataset_d9be0a23-55cb-4592-b3d9-eafb7a36220a.dat' 'renamed_parts/conn j-k.gb' && cp '/tmp/tmpi_f681b6/files/6/d/6/dataset_6d658022-b983-478e-8bc2-5e48f4e9c43b.dat' 'renamed_parts/conn l-n.gb' && cp '/tmp/tmpi_f681b6/files/5/7/8/dataset_5782320b-be5f-42fe-84af-f18bf7fa7ff2.dat' 'renamed_parts/conn l-r.gb' && cp '/tmp/tmpi_f681b6/files/b/7/6/dataset_b76e327a-3d5f-46b9-8d8d-b6b1c674db62.dat' 'renamed_parts/conn l-w.gb' && cp '/tmp/tmpi_f681b6/files/e/5/8/dataset_e58ab596-bdd8-4979-b1b4-99de2bf5b786.dat' 'renamed_parts/conn l-y.gb' && cp '/tmp/tmpi_f681b6/files/0/2/2/dataset_0224af58-bad1-42aa-becf-782d052b9730.dat' 'renamed_parts/conn q-r.gb' && cp '/tmp/tmpi_f681b6/files/e/d/c/dataset_edc15a94-7091-49ef-a34a-8eb3cd7ca528.dat' 'renamed_parts/conn r-w.gb' && cp '/tmp/tmpi_f681b6/files/8/e/3/dataset_8e3e7394-9770-4b0d-ac91-8327bd03f38c.dat' 'renamed_parts/conn t-v.gb' && cp '/tmp/tmpi_f681b6/files/d/d/2/dataset_dd245a49-5f5a-4d4e-b031-9cfff85b2ca8.dat' 'renamed_parts/conn w-x.gb' && cp '/tmp/tmpi_f681b6/files/a/f/e/dataset_afe91b71-315b-42e5-8caa-baf20351c00e.dat' 'renamed_parts/conn w-y.gb' && cp '/tmp/tmpi_f681b6/files/5/6/9/dataset_569452b3-a597-4dae-8353-5698bb45e241.dat' 'renamed_parts/conn w-z.gb' && cp '/tmp/tmpi_f681b6/files/c/1/d/dataset_c1d1c48c-5a8d-4e02-bb7d-46709b68de02.dat' 'renamed_parts/conn y-z.gb' && cp '/tmp/tmpi_f681b6/files/1/7/2/dataset_1722a1aa-e93a-4dea-a12d-adf2cff1d731.dat' 'renamed_parts/p10_tet-aptazyme.gb' && cp '/tmp/tmpi_f681b6/files/b/7/5/dataset_b75067eb-fc50-4b79-8bc5-73d73d9781ef.dat' 'renamed_parts/p11_sv40polya.gb' && cp '/tmp/tmpi_f681b6/files/e/a/0/dataset_ea0ef964-5b83-461c-8f1e-37f12a58dd38.dat' 'renamed_parts/p14_cmvp.gb' && cp '/tmp/tmpi_f681b6/files/3/8/1/dataset_381711b9-d963-4d77-bd66-b878668cde1c.dat' 'renamed_parts/p14_sv40p.gb' && cp '/tmp/tmpi_f681b6/files/e/3/f/dataset_e3f44043-cf5b-4bd2-b979-ed700373c731.dat' 'renamed_parts/p15_puror.gb' && cp '/tmp/tmpi_f681b6/files/1/d/6/dataset_1d69d1c7-6187-4bbe-aa06-c6c0ea9f1950.dat' 'renamed_parts/p16_bghpolya.gb' && cp '/tmp/tmpi_f681b6/files/7/a/5/dataset_7a5296ca-c574-4acf-b3e3-091fb9c2990e.dat' 'renamed_parts/p18_cmvp.gb' && cp '/tmp/tmpi_f681b6/files/4/4/9/dataset_449256af-869e-4132-9b78-4b176ea4926b.dat' 'renamed_parts/p18_ef1ap.gb' && cp '/tmp/tmpi_f681b6/files/b/9/b/dataset_b9b9cbf1-2afe-44ee-a71a-afebbf0187dc.dat' 'renamed_parts/p19_mneogreen.gb' && cp '/tmp/tmpi_f681b6/files/3/a/6/dataset_3a6792a7-38c1-42dd-8305-dd93c32d7752.dat' 'renamed_parts/p19_mruby2.gb' && cp '/tmp/tmpi_f681b6/files/3/5/1/dataset_35150438-cb43-4514-ba03-53e8fc4f2d62.dat' 'renamed_parts/p19_mtagbfp2.gb' && cp '/tmp/tmpi_f681b6/files/0/a/2/dataset_0a225817-00b7-45f7-961a-c767931ae92a.dat' 'renamed_parts/p19_tet-on-3g.gb' && cp '/tmp/tmpi_f681b6/files/1/3/f/dataset_13f22279-3a7a-481e-90a1-582485b0b90b.dat' 'renamed_parts/p1_5__sq__-itr-pb.gb' && cp '/tmp/tmpi_f681b6/files/0/4/c/dataset_04c05bd3-d589-4b86-8dcf-2a510f7df24f.dat' 'renamed_parts/p1_5__sq__ha-haavs1.gb' && cp '/tmp/tmpi_f681b6/files/6/8/7/dataset_68796f1c-a5e8-4865-b648-a6f1cfe8e10e.dat' 'renamed_parts/p20_ct-minute-nes.gb' && cp '/tmp/tmpi_f681b6/files/a/1/d/dataset_a1d6d6e9-0b10-47c3-b209-f003b1af9ec7.dat' 'renamed_parts/p20_ct-nes.gb' && cp '/tmp/tmpi_f681b6/files/d/7/0/dataset_d7061143-d1cd-4a08-a0c7-b1ccc9e4368b.dat' 'renamed_parts/p20_linker3.gb' && cp '/tmp/tmpi_f681b6/files/2/6/a/dataset_26a8e2e7-3757-47f5-a3b3-d957b7989b06.dat' 'renamed_parts/p20_p2a.gb' && cp '/tmp/tmpi_f681b6/files/6/7/3/dataset_673db7f6-df1b-46e4-923d-7a4b284fe47d.dat' 'renamed_parts/p21_dmra.gb' && cp '/tmp/tmpi_f681b6/files/5/1/9/dataset_519edf0f-9bc9-44c8-9bc4-9b1e6424d39c.dat' 'renamed_parts/p21_mkate2.gb' && cp '/tmp/tmpi_f681b6/files/f/d/5/dataset_fd517323-7c60-4f3e-a05d-266834a5393c.dat' 'renamed_parts/p21_mneogreen.gb' && cp '/tmp/tmpi_f681b6/files/0/6/c/dataset_06c5513c-abd2-4bfd-8519-668f761bd209.dat' 'renamed_parts/p21_mruby2.gb' && cp '/tmp/tmpi_f681b6/files/e/6/1/dataset_e61642a5-7006-4448-9cbe-e2d1572f1e80.dat' 'renamed_parts/p21_mtagbfp2.gb' && cp '/tmp/tmpi_f681b6/files/1/a/3/dataset_1a39752e-bc76-4f46-af81-a49926ff7224.dat' 'renamed_parts/p21_puror.gb' && cp '/tmp/tmpi_f681b6/files/f/d/3/dataset_fd351f42-4e3e-42ef-9725-4519573160c1.dat' 'renamed_parts/p22_pgkpolya.gb' && cp '/tmp/tmpi_f681b6/files/d/8/3/dataset_d8375e27-175d-49bd-b07a-2bdfd106f91a.dat' 'renamed_parts/p23_insulatorfb.gb' && cp '/tmp/tmpi_f681b6/files/7/c/4/dataset_7c405a03-cda8-4a5b-a966-a7da9ae36c90.dat' 'renamed_parts/p24_3__sq__ha_haavs1.gb' && cp '/tmp/tmpi_f681b6/files/6/e/7/dataset_6e7c3d1a-4b60-445a-a096-6ffa32d1b8cf.dat' 'renamed_parts/p24_3__sq__pb.gb' && cp '/tmp/tmpi_f681b6/files/8/4/8/dataset_848133c3-608d-4627-bbdd-ed937d1b009b.dat' 'renamed_parts/p25_sv40-ori.gb' && cp '/tmp/tmpi_f681b6/files/9/6/2/dataset_962361d5-701f-4da5-a707-427069091566.dat' 'renamed_parts/p2_insulatorfb.gb' && cp '/tmp/tmpi_f681b6/files/7/c/6/dataset_7c6f7c5d-19e3-4bee-9983-7ff75d39a153.dat' 'renamed_parts/p3_cagp.gb' && cp '/tmp/tmpi_f681b6/files/1/0/4/dataset_1042cf17-45cf-442e-b581-96bc3a5697ef.dat' 'renamed_parts/p3_cmvp_tet.gb' && cp '/tmp/tmpi_f681b6/files/c/1/1/dataset_c1115334-9b18-450e-ae1b-05e6706ee51b.dat' 'renamed_parts/p3_ef1ap.gb' && cp '/tmp/tmpi_f681b6/files/c/5/7/dataset_c570d71e-f33b-409d-a2d0-14f18b0d10ae.dat' 'renamed_parts/p3_tre3gp.gb' && cp '/tmp/tmpi_f681b6/files/4/8/d/dataset_48dd67ab-6056-4031-a5d1-427d923f56eb.dat' 'renamed_parts/p4_kt-l7ae -weiss.gb' && cp '/tmp/tmpi_f681b6/files/9/0/2/dataset_902c955b-e1b8-4afd-92d3-457a80da0742.dat' 'renamed_parts/p4_lac-o.gb' && cp '/tmp/tmpi_f681b6/files/4/f/3/dataset_4f383ead-bfd0-4985-bf88-8d2ae49772cc.dat' 'renamed_parts/p5_attb-bxb1.gb' && cp '/tmp/tmpi_f681b6/files/6/9/6/dataset_6965cbd4-0f66-43ad-a070-bed75261ba22.dat' 'renamed_parts/p5_attp-bxb1.gb' && cp '/tmp/tmpi_f681b6/files/a/1/e/dataset_a1e9dbf9-630b-4bb0-9aa7-b2e6fd221e1e.dat' 'renamed_parts/p5_k1-k1.gb' && cp '/tmp/tmpi_f681b6/files/5/0/2/dataset_50264e85-1143-4c12-9480-92a65c32e337.dat' 'renamed_parts/p5_kt-weiss.gb' && cp '/tmp/tmpi_f681b6/files/d/6/c/dataset_d6c9799f-e997-4941-8fe1-542759627558.dat' 'renamed_parts/p6_atg_boxc.gb' && cp '/tmp/tmpi_f681b6/files/6/f/8/dataset_6f86fba6-a5c1-44b4-b120-5016be553d5f.dat' 'renamed_parts/p6_kozak-atg.gb' && cp '/tmp/tmpi_f681b6/files/5/b/f/dataset_5bfaae1d-572d-4b11-ab85-f631cad39c43.dat' 'renamed_parts/p6_nt-igkl sequence.gb' && cp '/tmp/tmpi_f681b6/files/2/4/a/dataset_24ac6f21-53b5-43df-b49a-45639e939b5a.dat' 'renamed_parts/p6_nt-mls.gb' && cp '/tmp/tmpi_f681b6/files/8/1/8/dataset_8189baf0-93d3-4154-88f6-36203604b72f.dat' 'renamed_parts/p6_nt-myristoylation signal.gb' && cp '/tmp/tmpi_f681b6/files/7/1/b/dataset_71b1daec-ec14-4573-b1df-3e58bc4f0281.dat' 'renamed_parts/p6_nt-palm sequence.gb' && cp '/tmp/tmpi_f681b6/files/8/c/2/dataset_8c2bc0ea-6597-4734-9b07-1d8725b16872.dat' 'renamed_parts/p6_nt-sv40_nls.gb' && cp '/tmp/tmpi_f681b6/files/5/d/c/dataset_5dcc9d84-fcfa-4e4d-8c36-e07d9d6b4242.dat' 'renamed_parts/p7_bxb1.gb' && cp '/tmp/tmpi_f681b6/files/1/c/b/dataset_1cb6cb47-5783-4105-9401-4de98f7c6bc4.dat' 'renamed_parts/p7_l7ae-weiss.gb' && cp '/tmp/tmpi_f681b6/files/0/6/2/dataset_0623f4b7-0f93-459b-b0d7-8f4447eaa364.dat' 'renamed_parts/p7_l7ae.gb' && cp '/tmp/tmpi_f681b6/files/3/8/0/dataset_380607e0-8ad8-42a9-9e23-8d6072f908b6.dat' 'renamed_parts/p7_laci.gb' && cp '/tmp/tmpi_f681b6/files/b/7/a/dataset_b7a0879c-cef5-4258-8aca-7ef791bf490e.dat' 'renamed_parts/p7_mcherry.gb' && cp '/tmp/tmpi_f681b6/files/1/8/6/dataset_1862996f-08df-43f9-b5a6-4f3a575fe15e.dat' 'renamed_parts/p7_mkate2.gb' && cp '/tmp/tmpi_f681b6/files/2/6/e/dataset_26e3c60c-a237-4788-bedf-0548f92609f8.dat' 'renamed_parts/p7_mneogreen.gb' && cp '/tmp/tmpi_f681b6/files/0/9/7/dataset_09796d17-4be1-4d23-adae-afe292ccaade.dat' 'renamed_parts/p7_mruby2.gb' && cp '/tmp/tmpi_f681b6/files/9/d/1/dataset_9d1be7f1-28b6-48f7-ae0a-cbd2539d46c9.dat' 'renamed_parts/p7_mtagbfp2.gb' && cp '/tmp/tmpi_f681b6/files/d/6/c/dataset_d6cc98fa-6c64-4142-b743-bf285efb60b2.dat' 'renamed_parts/p8_linker1.gb' && cp '/tmp/tmpi_f681b6/files/b/f/d/dataset_bfdb38df-269b-45ea-8d6a-2694c36e17e6.dat' 'renamed_parts/p8_linker2.gb' && cp '/tmp/tmpi_f681b6/files/c/8/9/dataset_c89959ed-0b3f-4f53-b9d9-586f22a1af09.dat' 'renamed_parts/p8_p2a.gb' && cp '/tmp/tmpi_f681b6/files/d/f/e/dataset_dfea1759-69a9-4153-9464-1dca6276ceab.dat' 'renamed_parts/p8a_ct-kdel.gb' && cp '/tmp/tmpi_f681b6/files/b/3/7/dataset_b37d1c2e-0398-4e9e-b9b4-278d94fc4c0f.dat' 'renamed_parts/p8b_ires2.gb' && cp '/tmp/tmpi_f681b6/files/4/1/b/dataset_41ba1b68-ae25-48b4-a111-d7b89adf08d1.dat' 'renamed_parts/p9_a-tubulin.gb' && cp '/tmp/tmpi_f681b6/files/b/f/3/dataset_bf38856e-5049-4935-8e4a-72c2d8a951b7.dat' 'renamed_parts/p9_bsdr.gb' && cp '/tmp/tmpi_f681b6/files/2/b/0/dataset_2b022cd4-7278-4f6c-9080-4c6ff76217af.dat' 'renamed_parts/p9_dmrc.gb' && cp '/tmp/tmpi_f681b6/files/9/b/6/dataset_9b6085ca-d78d-42ef-90f1-efe5818c89eb.dat' 'renamed_parts/p9_firefly luciferase.gb' && cp '/tmp/tmpi_f681b6/files/e/8/d/dataset_e8d37f0f-fa56-4630-8829-1428ed44aff8.dat' 'renamed_parts/p9_mneogreen.gb' && cp '/tmp/tmpi_f681b6/files/5/5/f/dataset_55f63be7-f651-4029-8fb0-10853d6485a5.dat' 'renamed_parts/p9_mruby2.gb' && cp '/tmp/tmpi_f681b6/files/a/d/e/dataset_adea274e-bd6b-49de-84e6-967c9eddabb0.dat' 'renamed_parts/p9_mtagbfp2.gb' && cp '/tmp/tmpi_f681b6/files/5/b/4/dataset_5b424011-b574-4059-afe3-5a241314eff1.dat' 'renamed_parts/p9_neor.gb' && cp '/tmp/tmpi_f681b6/files/9/e/e/dataset_9eeff8cb-fa3a-4c17-b006-2ba69cb7c047.dat' 'renamed_parts/p9_puror.gb' && cp '/tmp/tmpi_f681b6/files/3/0/0/dataset_300aad29-8d06-4ab2-9142-91a91c247985.dat' 'source_plate.xlsx' && python '/home/rkhaled/galaxytools/tools/create_assembly_picklists/CreateAssemblyPicklists_script.py' --parts_files 'renamed_parts/HC_Amp_ccdB.gb,renamed_parts/conn a-c.gb,renamed_parts/conn b-e.gb,renamed_parts/conn b-l.gb,renamed_parts/conn d-e.gb,renamed_parts/conn d-f.gb,renamed_parts/conn h-ha.gb,renamed_parts/conn h-j.gb,renamed_parts/conn h-k.gb,renamed_parts/conn j-k.gb,renamed_parts/conn l-n.gb,renamed_parts/conn l-r.gb,renamed_parts/conn l-w.gb,renamed_parts/conn l-y.gb,renamed_parts/conn q-r.gb,renamed_parts/conn r-w.gb,renamed_parts/conn t-v.gb,renamed_parts/conn w-x.gb,renamed_parts/conn w-y.gb,renamed_parts/conn w-z.gb,renamed_parts/conn y-z.gb,renamed_parts/p10_tet-aptazyme.gb,renamed_parts/p11_sv40polya.gb,renamed_parts/p14_cmvp.gb,renamed_parts/p14_sv40p.gb,renamed_parts/p15_puror.gb,renamed_parts/p16_bghpolya.gb,renamed_parts/p18_cmvp.gb,renamed_parts/p18_ef1ap.gb,renamed_parts/p19_mneogreen.gb,renamed_parts/p19_mruby2.gb,renamed_parts/p19_mtagbfp2.gb,renamed_parts/p19_tet-on-3g.gb,renamed_parts/p1_5__sq__-itr-pb.gb,renamed_parts/p1_5__sq__ha-haavs1.gb,renamed_parts/p20_ct-minute-nes.gb,renamed_parts/p20_ct-nes.gb,renamed_parts/p20_linker3.gb,renamed_parts/p20_p2a.gb,renamed_parts/p21_dmra.gb,renamed_parts/p21_mkate2.gb,renamed_parts/p21_mneogreen.gb,renamed_parts/p21_mruby2.gb,renamed_parts/p21_mtagbfp2.gb,renamed_parts/p21_puror.gb,renamed_parts/p22_pgkpolya.gb,renamed_parts/p23_insulatorfb.gb,renamed_parts/p24_3__sq__ha_haavs1.gb,renamed_parts/p24_3__sq__pb.gb,renamed_parts/p25_sv40-ori.gb,renamed_parts/p2_insulatorfb.gb,renamed_parts/p3_cagp.gb,renamed_parts/p3_cmvp_tet.gb,renamed_parts/p3_ef1ap.gb,renamed_parts/p3_tre3gp.gb,renamed_parts/p4_kt-l7ae -weiss.gb,renamed_parts/p4_lac-o.gb,renamed_parts/p5_attb-bxb1.gb,renamed_parts/p5_attp-bxb1.gb,renamed_parts/p5_k1-k1.gb,renamed_parts/p5_kt-weiss.gb,renamed_parts/p6_atg_boxc.gb,renamed_parts/p6_kozak-atg.gb,renamed_parts/p6_nt-igkl sequence.gb,renamed_parts/p6_nt-mls.gb,renamed_parts/p6_nt-myristoylation signal.gb,renamed_parts/p6_nt-palm sequence.gb,renamed_parts/p6_nt-sv40_nls.gb,renamed_parts/p7_bxb1.gb,renamed_parts/p7_l7ae-weiss.gb,renamed_parts/p7_l7ae.gb,renamed_parts/p7_laci.gb,renamed_parts/p7_mcherry.gb,renamed_parts/p7_mkate2.gb,renamed_parts/p7_mneogreen.gb,renamed_parts/p7_mruby2.gb,renamed_parts/p7_mtagbfp2.gb,renamed_parts/p8_linker1.gb,renamed_parts/p8_linker2.gb,renamed_parts/p8_p2a.gb,renamed_parts/p8a_ct-kdel.gb,renamed_parts/p8b_ires2.gb,renamed_parts/p9_a-tubulin.gb,renamed_parts/p9_bsdr.gb,renamed_parts/p9_dmrc.gb,renamed_parts/p9_firefly luciferase.gb,renamed_parts/p9_mneogreen.gb,renamed_parts/p9_mruby2.gb,renamed_parts/p9_mtagbfp2.gb,renamed_parts/p9_neor.gb,renamed_parts/p9_puror.gb' --picklist '/tmp/tmpi_f681b6/files/9/9/7/dataset_997a41d8-270e-4c30-b18d-9977d95beda7.dat' --source_plate 'source_plate.xlsx' --backbone_name 'HC_Amp_ccdB' --part_backbone_ratio '1.0' --quantity_unit 'fmol' --part_quantity '1.3' --buffer_volume '0.3' --total_volume '1.0' --dispenser 'labcyte_echo' --result_zip 'picklist.zip' && cp 'picklist.zip' '/tmp/tmpi_f681b6/job_working_directory/000/94/outputs/dataset_bfec1bb4-30fa-42e4-ab22-8d435fad7ba2.dat'", "command_version": "", "copied_from_job_id": null, "create_time": "2025-08-06T07:38:06.620229", "dependencies": [], "exit_code": 0, "external_id": "17345", "galaxy_version": "25.0", "handler": null, "history_id": "22956832477b7615", "id": "9dd0ea47016230b4", "inputs": { "genbank_files1": { "id": "22956832477b7615", "src": "hda", "uuid": "65ad9574-cb7e-4ed9-ad0c-017016d8e92f" }, "genbank_files10": { "id": "1d32f3448e626e7f", "src": "hda", "uuid": "d9be0a23-55cb-4592-b3d9-eafb7a36220a" }, "genbank_files11": { "id": "373d193f79dd8d7d", "src": "hda", "uuid": "6d658022-b983-478e-8bc2-5e48f4e9c43b" }, "genbank_files12": { "id": "eb75b2de0fb16a3c", "src": "hda", "uuid": "5782320b-be5f-42fe-84af-f18bf7fa7ff2" }, "genbank_files13": { "id": "85ab0526df6ef8db", "src": "hda", "uuid": "b76e327a-3d5f-46b9-8d8d-b6b1c674db62" }, "genbank_files14": { "id": "cce9321c6ea3102e", "src": "hda", "uuid": "e58ab596-bdd8-4979-b1b4-99de2bf5b786" }, "genbank_files15": { "id": "3ea9418692598539", "src": "hda", "uuid": "0224af58-bad1-42aa-becf-782d052b9730" }, "genbank_files16": { "id": "2cbac7715efa3597", "src": "hda", "uuid": "edc15a94-7091-49ef-a34a-8eb3cd7ca528" }, "genbank_files17": { "id": "3049bac1d45e974b", "src": "hda", "uuid": "8e3e7394-9770-4b0d-ac91-8327bd03f38c" }, "genbank_files18": { "id": "45eab7b60225d246", "src": "hda", "uuid": "dd245a49-5f5a-4d4e-b031-9cfff85b2ca8" }, "genbank_files19": { "id": "ef0c6e7e7bcb0c5e", "src": "hda", "uuid": "afe91b71-315b-42e5-8caa-baf20351c00e" }, "genbank_files2": { "id": "c9e3c7b3dcd8d1f2", "src": "hda", "uuid": "1faa2257-725e-44e8-b913-740b6a05f8b2" }, "genbank_files20": { "id": "129e875a270d5718", "src": "hda", "uuid": "569452b3-a597-4dae-8353-5698bb45e241" }, "genbank_files21": { "id": "df7adf6389815b6f", "src": "hda", "uuid": "c1d1c48c-5a8d-4e02-bb7d-46709b68de02" }, "genbank_files22": { "id": "5172734b6aff2f70", "src": "hda", "uuid": "1722a1aa-e93a-4dea-a12d-adf2cff1d731" }, "genbank_files23": { "id": "035a795ab5a563c2", "src": "hda", "uuid": "b75067eb-fc50-4b79-8bc5-73d73d9781ef" }, "genbank_files24": { "id": "d58f046df9fad923", "src": "hda", "uuid": "ea0ef964-5b83-461c-8f1e-37f12a58dd38" }, "genbank_files25": { "id": "5910d88c6d113067", "src": "hda", "uuid": "381711b9-d963-4d77-bd66-b878668cde1c" }, "genbank_files26": { "id": "8942cb5a8dbebb47", "src": "hda", "uuid": "e3f44043-cf5b-4bd2-b979-ed700373c731" }, "genbank_files27": { "id": "ad8b2b5561141cbf", "src": "hda", "uuid": "1d69d1c7-6187-4bbe-aa06-c6c0ea9f1950" }, "genbank_files28": { "id": "1c8fd2442e00a371", "src": "hda", "uuid": "7a5296ca-c574-4acf-b3e3-091fb9c2990e" }, "genbank_files29": { "id": "9ffc43bac51ce8d8", "src": "hda", "uuid": "449256af-869e-4132-9b78-4b176ea4926b" }, "genbank_files3": { "id": "4a47d23da8498ffe", "src": "hda", "uuid": "ffa5bc2e-4322-4782-b1d2-c7dc9ba04350" }, "genbank_files30": { "id": "246bad70b00d28d5", "src": "hda", "uuid": "b9b9cbf1-2afe-44ee-a71a-afebbf0187dc" }, "genbank_files31": { "id": "d4a3726e81ef4745", "src": "hda", "uuid": "3a6792a7-38c1-42dd-8305-dd93c32d7752" }, "genbank_files32": { "id": "b886375aed9e1f6f", "src": "hda", "uuid": "35150438-cb43-4514-ba03-53e8fc4f2d62" }, "genbank_files33": { "id": "379b551b2d42a3c8", "src": "hda", "uuid": "0a225817-00b7-45f7-961a-c767931ae92a" }, "genbank_files34": { "id": "2659057ec51db8fa", "src": "hda", "uuid": "13f22279-3a7a-481e-90a1-582485b0b90b" }, "genbank_files35": { "id": "0a584ced6f6a7572", "src": "hda", "uuid": "04c05bd3-d589-4b86-8dcf-2a510f7df24f" }, "genbank_files36": { "id": "8f98981c884780d7", "src": "hda", "uuid": "68796f1c-a5e8-4865-b648-a6f1cfe8e10e" }, "genbank_files37": { "id": "37425fa6ccad77d1", "src": "hda", "uuid": "a1d6d6e9-0b10-47c3-b209-f003b1af9ec7" }, "genbank_files38": { "id": "6f16b98a74bc8e00", "src": "hda", "uuid": "d7061143-d1cd-4a08-a0c7-b1ccc9e4368b" }, "genbank_files39": { "id": "c688dcee3b6937db", "src": "hda", "uuid": "26a8e2e7-3757-47f5-a3b3-d957b7989b06" }, "genbank_files4": { "id": "5c77c8404c25bb2d", "src": "hda", "uuid": "9919b791-4b3f-47c6-a20a-a5c2d697fabc" }, "genbank_files40": { "id": "8437e75f835ccb82", "src": "hda", "uuid": "673db7f6-df1b-46e4-923d-7a4b284fe47d" }, "genbank_files41": { "id": "efb13fa079504263", "src": "hda", "uuid": "519edf0f-9bc9-44c8-9bc4-9b1e6424d39c" }, "genbank_files42": { "id": "7e4c20be7b251653", "src": "hda", "uuid": "fd517323-7c60-4f3e-a05d-266834a5393c" }, "genbank_files43": { "id": "1305f27defee0803", "src": "hda", "uuid": "06c5513c-abd2-4bfd-8519-668f761bd209" }, "genbank_files44": { "id": "000b996b18656356", "src": "hda", "uuid": "e61642a5-7006-4448-9cbe-e2d1572f1e80" }, "genbank_files45": { "id": "ba2fb4b2edb60418", "src": "hda", "uuid": "1a39752e-bc76-4f46-af81-a49926ff7224" }, "genbank_files46": { "id": "1e767f185385202b", "src": "hda", "uuid": "fd351f42-4e3e-42ef-9725-4519573160c1" }, "genbank_files47": { "id": "f7acfab5ba93c5b5", "src": "hda", "uuid": "d8375e27-175d-49bd-b07a-2bdfd106f91a" }, "genbank_files48": { "id": "4915ed4ffacdd1c2", "src": "hda", "uuid": "7c405a03-cda8-4a5b-a966-a7da9ae36c90" }, "genbank_files49": { "id": "36d78695b12c4628", "src": "hda", "uuid": "6e7c3d1a-4b60-445a-a096-6ffa32d1b8cf" }, "genbank_files5": { "id": "9c375d59650da59b", "src": "hda", "uuid": "f0b15343-39ee-40cb-8765-a4a84b7e0ea4" }, "genbank_files50": { "id": "6b747ad6c9cee45c", "src": "hda", "uuid": "848133c3-608d-4627-bbdd-ed937d1b009b" }, "genbank_files51": { "id": "383eaae012fdf9c2", "src": "hda", "uuid": "962361d5-701f-4da5-a707-427069091566" }, "genbank_files52": { "id": "244652812bc3a160", "src": "hda", "uuid": "7c6f7c5d-19e3-4bee-9983-7ff75d39a153" }, "genbank_files53": { "id": "e1f1ba4c1200e127", "src": "hda", "uuid": "1042cf17-45cf-442e-b581-96bc3a5697ef" }, "genbank_files54": { "id": "49c89262a579f642", "src": "hda", "uuid": "c1115334-9b18-450e-ae1b-05e6706ee51b" }, "genbank_files55": { "id": "f31913ae37b613d3", "src": "hda", "uuid": "c570d71e-f33b-409d-a2d0-14f18b0d10ae" }, "genbank_files56": { "id": "e1303d6b58429931", "src": "hda", "uuid": "48dd67ab-6056-4031-a5d1-427d923f56eb" }, "genbank_files57": { "id": "aa7ac43781a79b2a", "src": "hda", "uuid": "902c955b-e1b8-4afd-92d3-457a80da0742" }, "genbank_files58": { "id": "3a1b1b5978c4e950", "src": "hda", "uuid": "4f383ead-bfd0-4985-bf88-8d2ae49772cc" }, "genbank_files59": { "id": "0c4962b2ae5d171f", "src": "hda", "uuid": "6965cbd4-0f66-43ad-a070-bed75261ba22" }, "genbank_files6": { "id": "90821679061f5d56", "src": "hda", "uuid": "53023c35-65f6-4008-b84d-72fb7ecc4cba" }, "genbank_files60": { "id": "c3699454511b65cd", "src": "hda", "uuid": "a1e9dbf9-630b-4bb0-9aa7-b2e6fd221e1e" }, "genbank_files61": { "id": "7a4e651dae1f637e", "src": "hda", "uuid": "50264e85-1143-4c12-9480-92a65c32e337" }, "genbank_files62": { "id": "63a114c57a09ece2", "src": "hda", "uuid": "d6c9799f-e997-4941-8fe1-542759627558" }, "genbank_files63": { "id": "841706915b868401", "src": "hda", "uuid": "6f86fba6-a5c1-44b4-b120-5016be553d5f" }, "genbank_files64": { "id": "e99bfa41665be298", "src": "hda", "uuid": "5bfaae1d-572d-4b11-ab85-f631cad39c43" }, "genbank_files65": { "id": "9c3c4a4fff67573c", "src": "hda", "uuid": "24ac6f21-53b5-43df-b49a-45639e939b5a" }, "genbank_files66": { "id": "ff0e587c81161b2c", "src": "hda", "uuid": "8189baf0-93d3-4154-88f6-36203604b72f" }, "genbank_files67": { "id": "fe70f0b27d923f25", "src": "hda", "uuid": "71b1daec-ec14-4573-b1df-3e58bc4f0281" }, "genbank_files68": { "id": "4faf474a2c8f3c64", "src": "hda", "uuid": "8c2bc0ea-6597-4734-9b07-1d8725b16872" }, "genbank_files69": { "id": "2b00b014be500121", "src": "hda", "uuid": "5dcc9d84-fcfa-4e4d-8c36-e07d9d6b4242" }, "genbank_files7": { "id": "6d1080b1996a1abf", "src": "hda", "uuid": "4345db76-3776-4c15-a608-cbfcbf1755ce" }, "genbank_files70": { "id": "dabb0e22039e1e30", "src": "hda", "uuid": "1cb6cb47-5783-4105-9401-4de98f7c6bc4" }, "genbank_files71": { "id": "b3b3ff8447bc5856", "src": "hda", "uuid": "0623f4b7-0f93-459b-b0d7-8f4447eaa364" }, "genbank_files72": { "id": "5dea811d5323ae83", "src": "hda", "uuid": "380607e0-8ad8-42a9-9e23-8d6072f908b6" }, "genbank_files73": { "id": "a7d43d2a9ea42d32", "src": "hda", "uuid": "b7a0879c-cef5-4258-8aca-7ef791bf490e" }, "genbank_files74": { "id": "bb42b49cda58bf10", "src": "hda", "uuid": "1862996f-08df-43f9-b5a6-4f3a575fe15e" }, "genbank_files75": { "id": "da38245ea35cc47d", "src": "hda", "uuid": "26e3c60c-a237-4788-bedf-0548f92609f8" }, "genbank_files76": { "id": "6b74d372e476dd97", "src": "hda", "uuid": "09796d17-4be1-4d23-adae-afe292ccaade" }, "genbank_files77": { "id": "20ed3b370dde2253", "src": "hda", "uuid": "9d1be7f1-28b6-48f7-ae0a-cbd2539d46c9" }, "genbank_files78": { "id": "f61cc883a97b71d4", "src": "hda", "uuid": "d6cc98fa-6c64-4142-b743-bf285efb60b2" }, "genbank_files79": { "id": "e604810e2ac4bd19", "src": "hda", "uuid": "bfdb38df-269b-45ea-8d6a-2694c36e17e6" }, "genbank_files8": { "id": "84b4c081a2c5daff", "src": "hda", "uuid": "2f98e110-7de4-422d-938e-177083ccfe5e" }, "genbank_files80": { "id": "3555e3ab6f4baab2", "src": "hda", "uuid": "c89959ed-0b3f-4f53-b9d9-586f22a1af09" }, "genbank_files81": { "id": "837f19907e6e019d", "src": "hda", "uuid": "dfea1759-69a9-4153-9464-1dca6276ceab" }, "genbank_files82": { "id": "f4384539d1a180e7", "src": "hda", "uuid": "b37d1c2e-0398-4e9e-b9b4-278d94fc4c0f" }, "genbank_files83": { "id": "c278cedeebcc4b72", "src": "hda", "uuid": "41ba1b68-ae25-48b4-a111-d7b89adf08d1" }, "genbank_files84": { "id": "609c0533b2b6aace", "src": "hda", "uuid": "bf38856e-5049-4935-8e4a-72c2d8a951b7" }, "genbank_files85": { "id": "278bf972c860f4d3", "src": "hda", "uuid": "2b022cd4-7278-4f6c-9080-4c6ff76217af" }, "genbank_files86": { "id": "90f32e860d099bb6", "src": "hda", "uuid": "9b6085ca-d78d-42ef-90f1-efe5818c89eb" }, "genbank_files87": { "id": "6410822008faeb8e", "src": "hda", "uuid": "e8d37f0f-fa56-4630-8829-1428ed44aff8" }, "genbank_files88": { "id": "61cacbd5a45b2941", "src": "hda", "uuid": "55f63be7-f651-4029-8fb0-10853d6485a5" }, "genbank_files89": { "id": "4f0f19657ee38b4d", "src": "hda", "uuid": "adea274e-bd6b-49de-84e6-967c9eddabb0" }, "genbank_files9": { "id": "3378e63b77969eee", "src": "hda", "uuid": "72d9fac0-2dc0-4147-92fb-e2bf5f75ed19" }, "genbank_files90": { "id": "2eb1540106f06799", "src": "hda", "uuid": "5b424011-b574-4059-afe3-5a241314eff1" }, "genbank_files91": { "id": "c492414f61190e0e", "src": "hda", "uuid": "9eeff8cb-fa3a-4c17-b006-2ba69cb7c047" }, "picklist": { "id": "4a52c33acfdf00c5", "src": "hda", "uuid": "997a41d8-270e-4c30-b18d-9977d95beda7" }, "source_plate": { "id": "96bb517ec4711730", "src": "hda", "uuid": "300aad29-8d06-4ab2-9142-91a91c247985" } }, "job_messages": [], "job_metrics": [], "job_runner_name": null, "job_stderr": "", "job_stdout": "", "model_class": "Job", "output_collections": {}, "outputs": { "output_zip": { "id": "9dd0ea47016230b4", "src": "hda", "uuid": "bfec1bb4-30fa-42e4-ab22-8d435fad7ba2" } }, "params": { "__input_ext": "\"input\"", "backbone_name": "\"HC_Amp_ccdB\"", "buffer_volume": "\"0.3\"", "chromInfo": "\"/tmp/tmpi_f681b6/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"", "dbkey": "\"?\"", "dispenser": "\"labcyte_echo\"", "genbank_files": "{\"values\": [{\"id\": 1, \"src\": \"hdca\"}]}", "part_backbone_ratio": "\"1.0\"", "part_quantity": "\"1.3\"", "quantity_unit": "\"fmol\"", "total_volume": "\"1.0\"" }, "state": "ok", "stderr": "", "stdout": "Generating picklist\nDEBUG : source_plate.xlsx\nWriting report...\nsuccess: True\n", "tool_id": "create_assembly_picklists", "tool_stderr": "", "tool_stdout": "Generating picklist\nDEBUG : source_plate.xlsx\nWriting report...\nsuccess: True\n", "update_time": "2025-08-06T07:38:19.249975", "user_email": "planemo@galaxyproject.org", "user_id": "22956832477b7615" }, "status": "success", "test_index": 0, "time_seconds": 263.1747727394104, "tool_id": "create_assembly_picklists", "tool_version": "0.1.0+galaxy0" }, "has_data": true, "id": "create_assembly_picklists-0" } ], "version": "0.1" }