Mercurial > repos > tduigou > create_assembly_picklists

comparison create_assembly_picklists.xml @ 6:efd0c39c6bee draft

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planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Plateo commit ed922f834f891e6048385803c3004465551c911d-dirty
author tduigou
date Thu, 07 Aug 2025 12:24:24 +0000
parents bb70a954048e
children 9f35d1450906
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5:bb70a954048e 6:efd0c39c6bee
338 **If Part quantity unit is ng**: Backbone Molar Ratio calculation is not performed in this case. 338 **If Part quantity unit is ng**: Backbone Molar Ratio calculation is not performed in this case.
339 339
340 **Mode**: 340 **Mode**:
341 --------- 341 ---------
342 This option allows you to choose the mode in which the tool will be executed: 342 This option allows you to choose the mode in which the tool will be executed:
343 * **Standard**: Runs the tool as a standalone application. 343 * **Standard**: Runs the tool as a standalone application.
344 * **DEMO**: Runs the tool as a standalone application with default parameters adapted to the demo dataset: 344 * **DEMO**: Runs the tool as a standalone application with default parameters adapted to the demo dataset:
345 - GenBank File(s): `Download... <https://files.osf.io/v1/resources/x2sj3/providers/osfstorage/689496483e21964670f62efc/?zip=>`_ NOTE: make files as collection list (`How to make collection <https://files.osf.io/v1/resources/x2sj3/providers/osfstorage/689496483e21964670f62efc/?zip=>`_) 345 - GenBank File(s): `Download... <https://files.osf.io/v1/resources/x2sj3/providers/osfstorage/689496483e21964670f62efc/?zip=>`_ NOTE: make files as collection list (`How to make collection <https://training.galaxyproject.org/training-material/topics/galaxy-interface/tutorials/collections/tutorial.html>`_)
346 - Assembly Plan (csv or excel): `Download... <hhttps://osf.io/download/6894965a96fb8cc5376b0c92/>`_ 346 - Assembly Plan (csv or excel): `Download... <https://osf.io/download/6894965a96fb8cc5376b0c92/>`_
347 - Source Plate (excel): `Download... <https://osf.io/download/6894965b7d01c1cf281b52d3/>`_ 347 - Source Plate (excel): `Download... <https://osf.io/download/6894965b7d01c1cf281b52d3/>`_
348 ]]></help> 348 ]]></help>
349 <citations> 349 <citations>
350 <citation type="bibtex"> 350 <citation type="bibtex">
351 @unpublished{create_assembly_picklists 351 @unpublished{create_assembly_picklists
352 author = {Ramiz Khaled}, 352 author = {Ramiz Khaled},