Mercurial > repos > tduigou > cloning_simulation

comparison cloning_simulation.py @ 11:be6889ab2df8 draft

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planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/DnaCauldron/tree/master commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
author tduigou
date Mon, 26 May 2025 09:54:05 +0000
parents eaff3028ba07
children 556649b3f9bb
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10:0be569bd5443 11:be6889ab2df8
84 84
85 assembly_plan = dnacauldron.AssemblyPlan.from_spreadsheet( 85 assembly_plan = dnacauldron.AssemblyPlan.from_spreadsheet(
86 name="auto_from_filename", 86 name="auto_from_filename",
87 path=new_csvname, 87 path=new_csvname,
88 dataframe=None, 88 dataframe=None,
89 header=None, 89 header=[0],
90 assembly_class=assembly_class 90 assembly_class=assembly_class
91 ) 91 )
92 if enzyme != 'auto': 92 if enzyme != 'auto':
93 for assembly in assembly_plan.assemblies: 93 for assembly in assembly_plan.assemblies:
94 assembly.enzyme = enzyme 94 assembly.enzyme = enzyme