Mercurial > repos > simon-gladman > velvet_optimiser_2_2_5

diff tool_dependencies.xml @ 11:f931896fad96 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author bgruening
date Tue, 23 Jul 2013 13:23:55 -0400
parents 78f59ea7d5d1
children
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Jul 23 04:18:00 2013 -0400
+++ b/tool_dependencies.xml	Tue Jul 23 13:23:55 2013 -0400
@@ -3,9 +3,6 @@
     <package name="package_velvet_1_2" version="1.2.08">
         <repository changeset_revision="2d5ea3fd6508" name="package_velvet_1_2" owner="simon-gladman" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <action type="set_environment">
-        <environment_variable name="VOPT_SCRIPT_PATH" action="set_to">$INSTALL_DIR/bin</environment_variable>   
-    </action>
     <package name="velvetoptimiser_2_2_5" version="2.2.5">
         <install version="1.0">
             <actions>
@@ -14,10 +11,10 @@
                     <source_directory>.</source_directory>
                     <destination_directory>$INSTALL_DIR/bin</destination_directory>
                 </action>
+                <action type="shell_command">chmod ugo+x $INSTALL_DIR/bin/VelvetOptimiser.pl</action>
                 <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                 </action>
-                <action type="shell_command">chmod ugo+x $INSTALL_DIR/bin/VelvetOptimiser.pl</action>
             </actions>
         </install>
     </package>