Mercurial > repos > simon-gladman > velvet_optimiser_2_2_5

diff tool_dependencies.xml @ 5:147411da6985 draft

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Uploaded
author simon-gladman
date Tue, 23 Jul 2013 00:53:47 -0400
parents d790c804f62a
children 78f59ea7d5d1
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Jul 22 21:34:30 2013 -0400
+++ b/tool_dependencies.xml	Tue Jul 23 00:53:47 2013 -0400
@@ -1,10 +1,10 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="package_velvet_1_2" version="1.2.08">
-        <repository changeset_revision="d16c72914c82" name="package_velvet_1_2" owner="simon-gladman" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="2d5ea3fd6508" name="package_velvet_1_2" owner="simon-gladman" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <set_environment version="1.0">
-        <environment_variable name="VELVET_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>   
+    <action type="set_environment">
+        <environment_variable name="VOPT_SCRIPT_PATH" action="set_to">$INSTALL_DIR/bin</environment_variable>   
     </set_environment>
     <package name="velvetoptimiser_2_2_5" version="2.2.5">
         <install version="1.0">
@@ -17,7 +17,7 @@
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                 </action>
-                <action type="shell_command">chmod +x $INSTALL_DIR/bin/VelvetOptimiser.pl</action>
+                <action type="shell_command">chmod ugo+x $INSTALL_DIR/bin/VelvetOptimiser.pl</action>
             </actions>
         </install>
     </package>